Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq10678 93.3 4e-14
>seq10678
Length=68604
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 17216 TTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATG 17275
||||| | | | ||| | ||||| || || ||||| | ||||||||||| || ||
Sbjct 45511 TTTTCTTTTGGATCGGTAATATAAGTTTCAATGAGCAAAGAATACATTTCGGAATGAATA 45452
Query 17276 TTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACG 17335
||||| ||||| || || || ||||| || || || ||||| || | || || |||
Sbjct 45451 TTCTCTATGGCCATTTGGAAGCCGTAGAAACAACGTGCTTCAGCGACTTTCACCTCCTGA 45392
Query 17336 TAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAAT 17395
||||| ||| ||||| ||||| || || || || ||||||||||| |||||
Sbjct 45391 CTGAATCTTTCAATCAGATTCTCGTTAACAATACCATCAGAAGCGGCGAAAAATGCCAAG 45332
Query 17396 ATATGCTTAATGAAATATTTTTCGTC 17421
| ||| || || ||| |||||||
Sbjct 45331 ACATGAGAGATAAAGTATCTTTCGTC 45306
Score = 87.8 bits (96), Expect = 2e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 16788 CGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTA 16847
||| |||||| || || |||||||| ||||| | ||||| | | ||| ||||| ||||
Sbjct 46271 CGAATAATCTGTCTGCAACAAATTCGATATAGTTACACATGAGTGTGCAATTCATGCCTA 46212
Query 16848 TAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAA 16907
| || ||||| | || | |||||||||| | || || | || || ||| | |
Sbjct 46211 TCAGCTCGACCGGCAACGCCTGCGTCAAAAATTCCTTTTCGATTTCCACAGCATCCATTA 46152
Query 16908 TAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967
| || || ||||| ||||| | ||| || ||||||||||| | |||||
Sbjct 46151 TGATTGATTTTACACGTTCAAATGACGGCTTTTGTACAATGTGTTTAAACATTAAACATG 46092
Query 16968 CGAAATCGCAATGTAATCCCT 16988
| |||||||| ||||||||||
Sbjct 46091 CAAAATCGCAGTGTAATCCCT 46071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517467088332480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |