Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq10678 87.8 2e-12 >seq10678 Length=68604 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 16465 ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGC 16524 |||| | ||||| || ||||| || ||| |||||||| || || || ||||||||||| Sbjct 45500 ATCGGTAATATAAGTTTCAATGAGCAAAGAATACATTTCGGAATGAATATTCTCTATGGC 45441 Query 16525 TATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTC 16584 || || || || ||||| || || || || || | || || ||| |||| ||| Sbjct 45440 CATTTGGAAGCCGTAGAAACAACGTGCTTCAGCGACTTTCACCTCCTGACTGAATCTTTC 45381 Query 16585 CGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAAT 16644 ||| ||||| || || ||||| ||| || || ||||| ||||| | || || Sbjct 45380 AATCAGATTCTCGTTAACAATACCATCAGAAGCGGCGAAAAATGCCAAGACATGAGAGAT 45321 Query 16645 GAAATATTTTTCGTCAGA 16662 || ||| ||||||| || Sbjct 45320 AAAGTATCTTTCGTCGGA 45303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511336818435520