Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq10593 122 6e-23 >seq10593 Length=94130 Score = 122 bits (134), Expect = 6e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| || || || |||| |||||| || ||||| |||||||| | ||| || | Sbjct 2193 CTTTGTATTCGGCGCCAAAGTGCCGCCACTGGAAACCATAGACAGGTCCCAAATCGCCCT 2252 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | || || ||| |||||| || || || | | || |||||| ||||||||| Sbjct 2253 CTTCCCTATCAGTGAAACCATAGGAGTCCAAGAAAGCCCGCGAACCATTCTCATCCCAAA 2312 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACA 102212 | || || || ||| | |||||| || || |||||| |||||||||||| || Sbjct 2313 TATGAACACCTTTATCTGTCAACTCTTTCGAGTTTGTTGATCCTTTGATAAACCACAGCA 2372 Query 102213 GTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGT 102252 |||| ||||| || ||| ||| ||||||||||| || || Sbjct 2373 GTTCCTCAACTACTGCTCGCCAGAATACTCTCTTGGTTGT 2412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361197768238136