Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq10593 127 1e-24 >seq10593 Length=94130 Score = 127 bits (140), Expect = 1e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || ||||| |||| ||| ||||| ||||| |||||||| | || || ||||| Sbjct 2198 TATTCGGCGCCAAAGTGCCGCCACTGGAAACCATAGACAGGTCCCAAATCGCCCTCTTCC 2257 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGC 97521 |||||| ||||||| || || | | || || ||||| |||||||||| || Sbjct 2258 CTATCAGTGAAACCATAGGAGTCCAAGAAAGCCCGCGAACCATTCTCATCCCAAATATGA 2317 Query 97522 ACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCT 97581 ||||| ||| | |||||| || || |||||| |||||||||||| || ||| Sbjct 2318 ACACCTTTATCTGTCAACTCTTTCGAGTTTGTTGATCCTTTGATAAACCACAGCAGTTCC 2377 Query 97582 TCCACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 || || || ||| ||| ||||||||||| ||||| Sbjct 2378 TCAACTACTGCTCGCCAGAATACTCTCTTGGTTGT 2412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346732708045520