Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq10678 82.4 7e-11 >seq10678 Length=68604 Score = 82.4 bits (90), Expect = 7e-11 Identities = 130/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511 || ||| ||||| | | | ||| || || ||||| || || ||||||||| || || Sbjct 45515 TTACTTTTCTTTTGGATCGGTAATATAAGTTTCAATGAGCAAAGAATACATTTCGGAATG 45456 Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14571 || || || || || || || || || || ||||| | ||||| | || ||||| Sbjct 45455 AATATTCTCTATGGCCATTTGGAAGCCGTAGAAACAACGTGCTTCAGCGACTTTCACCTC 45396 Query 14572 -TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630 ||| | || |||||| || ||| || ||||| ||||||||| ||| || ||||||| Sbjct 45395 CTGACTGAA-TCTTTCAATCAGATTCTCGTTAACAATACCATCAGAAGCGGCGAAAAATG 45337 Query 14631 CCAA 14634 |||| Sbjct 45336 CCAA 45333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482272428172480