Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq10678 82.4 7e-11
>seq10678
Length=68604
Score = 82.4 bits (90), Expect = 7e-11
Identities = 130/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 14452 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14511
|| ||| ||||| | | | ||| || || ||||| || || ||||||||| || ||
Sbjct 45515 TTACTTTTCTTTTGGATCGGTAATATAAGTTTCAATGAGCAAAGAATACATTTCGGAATG 45456
Query 14512 TATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14571
|| || || || || || || || || || ||||| | ||||| | || |||||
Sbjct 45455 AATATTCTCTATGGCCATTTGGAAGCCGTAGAAACAACGTGCTTCAGCGACTTTCACCTC 45396
Query 14572 -TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATG 14630
||| | || |||||| || ||| || ||||| ||||||||| ||| || |||||||
Sbjct 45395 CTGACTGAA-TCTTTCAATCAGATTCTCGTTAACAATACCATCAGAAGCGGCGAAAAATG 45337
Query 14631 CCAA 14634
||||
Sbjct 45336 CCAA 45333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482272428172480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |