Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq10678 86.0 6e-12 >seq10678 Length=68604 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 13908 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 13967 || ||| ||||| | | | ||| || || ||||| || || ||||||||| || || Sbjct 45515 TTACTTTTCTTTTGGATCGGTAATATAAGTTTCAATGAGCAAAGAATACATTTCGGAATG 45456 Query 13968 TATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027 || || ||||| || || || || || || ||||| | ||||| | || ||||| Sbjct 45455 AATATTCTCTATGGCCATTTGGAAGCCGTAGAAACAACGTGCTTCAGCGACTTTCACCTC 45396 Query 14028 C-GAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATG 14086 | || | || |||||| || || || ||||||||||||||| ||| || ||||||| Sbjct 45395 CTGACTGAA-TCTTTCAATCAGATTCTCGTTAACAATACCATCAGAAGCGGCGAAAAATG 45337 Query 14087 CCAA 14090 |||| Sbjct 45336 CCAA 45333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478516198079040