Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_004688.1
Length=110865
Score E
Sequences producing significant alignments: (Bits) Value
seq8096 100 2e-16
>seq8096
Length=1015
Score = 100 bits (110), Expect = 2e-16
Identities = 133/182 (73%), Gaps = 7/182 (4%)
Strand=Plus/Plus
Query 99387 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 99446
|||| |||||| ||||| || | || || ||| ||| |||||||||||||||| ||
Sbjct 118 GTTGGCCTTGATCAGGCCGGTGATGACGTCGACGCTGGGACGCTGCGTCGCCAGGATCAG 177
Query 99447 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTT 99506
|| ||||||||||| |||||||||||||| | |||| | ||| | || | | ||
Sbjct 178 GTGGATGCCGGCCGCGCGCGCCTTCTGCGCCAGGCGGGCGATGAGTTCTTCGATC---TT 234
Query 99507 CTTGTAGCCAC--CCATCATGAGATCAGCGAGTTCATCCACCACTACCACGATGTAGGGG 99564
|||| |||| ||||||| || || || || || || | || ||||||||| |||
Sbjct 235 CTTG--CCCACCACCATCATCAGGTCGGCCAGCTCGTCGATGACCACCACGATGGTGGGT 292
Query 99565 AG 99566
||
Sbjct 293 AG 294
Score = 86.0 bits (94), Expect = 4e-12
Identities = 114/156 (73%), Gaps = 7/156 (4%)
Strand=Plus/Plus
Query 99762 AGGGGTCGCCCG-GTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTGGACTTGCCCG 99820
||| |||| || ||| |||||||| | | ||| | |||||| | ||||||||||
Sbjct 576 AGGCGTCGGCCTTGTACAGCAGCGACAGGATCATGGCGTTGATCCCGACCGACTTGCCCG 635
Query 99821 ATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAGGGAGATGTCC- 99879
| ||||| | ||| ||||||| ||| ||||||||||| ||||||| || | ||
Sbjct 636 ACCCGGTGGTGCCCGCCACCAACAGGTGCGGCATCTTGGCCAGGT---CGGCCACCACCG 692
Query 99880 --TTGCCCTCGACGTCCTTGCCCACTGCCACGGTCA 99913
||||| ||| ||||||||||| |||| |||||
Sbjct 693 GATTGCCGGCGATGTCCTTGCCCAGCGCCATGGTCA 728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354590745610896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |