Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq8219 107 2e-18 >seq8219 Length=1455 Score = 107 bits (118), Expect = 2e-18 Identities = 185/265 (70%), Gaps = 8/265 (3%) Strand=Plus/Plus Query 6913 CTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACAT 6972 ||||||||| || ||| | ||| ||||| ||||| ||||||||| | ||| | ||| Sbjct 510 CTTGCCCGAGGCGTTCACCTTGGCACCGTGGGTGAGGTGGCCGCCGTGGGCCAGGCTCAT 569 Query 6973 AGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGA 7032 |||| | | |||||||||| ||| || || ||| || |||||||| || || || Sbjct 570 GCCGAGGATGGTGTCACCCGGCTGCAGCAGGGCGAAGTACACGGCCTGGTTGGCCTGCGA 629 Query 7033 ACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTT-CTTTAGCACGCTCAA 7091 |||| || || || ||||| ||| | | | | ||||| | ||| || || || | Sbjct 630 ACCGCTGTGCGGCTGCACGTTGGCGTAGTCGGCGCCGAACAGCTGCTTCAGG-CGGTCGA 688 Query 7092 TTGCCAGGTTCTCG---ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCG 7148 | ||||| | |||| || || || || |||| || || || || || ||||||| Sbjct 689 TCGCCAGCTGCTCGGCGATGTCCACGTATT---CGCAACCACCGTAGTAGCGCTTGCCCG 745 Query 7149 GATATCCCTCAGCATACTTGTTGGT 7173 | || || || || ||||||||||| Sbjct 746 GGTAGCCTTCGGCGTACTTGTTGGT 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555278951402560