Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq7345 105 2e-18 >seq7345 Length=15758 Score = 105 bits (116), Expect = 2e-18 Identities = 244/365 (67%), Gaps = 7/365 (2%) Strand=Plus/Plus Query 16634 AACCAGCTGGAAGTGACGGCCATCGGGTGTACTCGACAGAGCGAAGCCCACCGTAAGGGC 16693 |||| | | || ||| | ||||| || || || || |||| || ||||| || || Sbjct 8556 AACCCGGTCGAGGTGGCAGCCATTGGCTGCACCCGCGAGAGTGAGGCCCAGCGGCGCGGA 8615 Query 16694 CTGTGGGGCATACTGACCAACAACAAAGACCGCATGGTTGAGATTGATGTGGGGCTGGAC 16753 |||| || |||||||||| | | || |||| ||| | | | ||| |||| Sbjct 8616 AAATGGGCGATCCTGACCAACAGCCAGGATCGCACGGTAACGTTCCGTACCGGGATGGAT 8675 Query 16754 GGTAAAATCCCGCAGCCGGGCTACATCATTGGACTGGCTGATGAACTTCTGGCCGGACGC 16813 || || |||| |||||| | | ||| ||||||||| || |||| ||||| Sbjct 8676 GGAGCGATACCGCTGCCGGGATGGGTGATTCCGGTGGCTGATGCGCTGTTGGCTGGACGG 8735 Query 16814 GTGAACGGCGGGCG--TATCAGCGCAGTTAATGGACGGGTGATTACCCTTGACCGGGATA 16871 | || || ||||| | || ||| ||| ||| || ||||| ||| | || || |||| Sbjct 8736 GAGATTGGGGGGCGGGTTTCTGCG--GTTGCTGGCCGAGTGATCACCTTGGATCGCGATA 8793 Query 16872 CTGATGCAAAAGCTGGTGACCGGCTGCAGCTGAACCTGCCGTCAGGCATATCTCAGGCCC 16931 | | ||||| ||||| |||||||||| ||||||||||| || | || |||| | Sbjct 8794 CCCAGGCAAAGGCTGGCGACCGGCTGCTCCTGAACCTGCCCAGCGGTAAGGCTGAGGCGC 8853 Query 16932 GGACGATCCAGTCAGTCAACGGTCTCCGACAGGTCACGGTTACGACGGCGTACAGTGAGA 16991 | || | ||||| || | ||| || ||| || || ||||| || ||||| |||| Sbjct 8854 GAACCGTGCAGTCGGTAACCGG---GCGCGCGGTGACCGTGACGACAGCCTACAGCGAGA 8910 Query 16992 CGCCG 16996 | ||| Sbjct 8911 CCCCG 8915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164977820794416