Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_005857.1
Length=51601
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 105 2e-18
>seq7345
Length=15758
Score = 105 bits (116), Expect = 2e-18
Identities = 244/365 (67%), Gaps = 7/365 (2%)
Strand=Plus/Plus
Query 16634 AACCAGCTGGAAGTGACGGCCATCGGGTGTACTCGACAGAGCGAAGCCCACCGTAAGGGC 16693
|||| | | || ||| | ||||| || || || || |||| || ||||| || ||
Sbjct 8556 AACCCGGTCGAGGTGGCAGCCATTGGCTGCACCCGCGAGAGTGAGGCCCAGCGGCGCGGA 8615
Query 16694 CTGTGGGGCATACTGACCAACAACAAAGACCGCATGGTTGAGATTGATGTGGGGCTGGAC 16753
|||| || |||||||||| | | || |||| ||| | | | ||| ||||
Sbjct 8616 AAATGGGCGATCCTGACCAACAGCCAGGATCGCACGGTAACGTTCCGTACCGGGATGGAT 8675
Query 16754 GGTAAAATCCCGCAGCCGGGCTACATCATTGGACTGGCTGATGAACTTCTGGCCGGACGC 16813
|| || |||| |||||| | | ||| ||||||||| || |||| |||||
Sbjct 8676 GGAGCGATACCGCTGCCGGGATGGGTGATTCCGGTGGCTGATGCGCTGTTGGCTGGACGG 8735
Query 16814 GTGAACGGCGGGCG--TATCAGCGCAGTTAATGGACGGGTGATTACCCTTGACCGGGATA 16871
| || || ||||| | || ||| ||| ||| || ||||| ||| | || || ||||
Sbjct 8736 GAGATTGGGGGGCGGGTTTCTGCG--GTTGCTGGCCGAGTGATCACCTTGGATCGCGATA 8793
Query 16872 CTGATGCAAAAGCTGGTGACCGGCTGCAGCTGAACCTGCCGTCAGGCATATCTCAGGCCC 16931
| | ||||| ||||| |||||||||| ||||||||||| || | || |||| |
Sbjct 8794 CCCAGGCAAAGGCTGGCGACCGGCTGCTCCTGAACCTGCCCAGCGGTAAGGCTGAGGCGC 8853
Query 16932 GGACGATCCAGTCAGTCAACGGTCTCCGACAGGTCACGGTTACGACGGCGTACAGTGAGA 16991
| || | ||||| || | ||| || ||| || || ||||| || ||||| ||||
Sbjct 8854 GAACCGTGCAGTCGGTAACCGG---GCGCGCGGTGACCGTGACGACAGCCTACAGCGAGA 8910
Query 16992 CGCCG 16996
| |||
Sbjct 8911 CCCCG 8915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164977820794416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |