Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq5678 91.5 4e-14 >seq5678 Length=1680 Score = 91.5 bits (100), Expect = 4e-14 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 22947 TGAAGCTACCGGACTTCGGACCGGTATCGCAGGACCGATACGCTCTGCGGCAGCTGCGCG 23006 ||||||| ||||||||||| ||| | |||||||| | || | | || | | || | Sbjct 964 TGAAGCTGCCGGACTTCGGGCCGCTGTCGCAGGATATCTGGGCCATTCAGCTGATCCGGG 905 Query 23007 AGCATGGCGCGTTGCCGCTGATCGACGCCGGTCGCTTCTGCGAGGCGGTGGCGAAGGTAT 23066 ||| | | ||| ||||||||||| | | |||||| || ||||| | || ||||| Sbjct 904 AGCGTCGAGCGCTGCCGCTGATCCAGTCGGGTCGCATCGCGGAGGCCATCGCCAAGGTCC 845 Query 23067 CGAACGTATGGGCCAGTCTGCCAGGAGCCGGGTACGGGCAGCACGAAAACAAGATGGAAC 23126 ||| | ||||| || ||||| || ||||| || || |||| ||| || ||| ||| Sbjct 844 GCAACATCTGGGCGAGCCTGCCGGGGGCCGGCTATGGCCAGCCCGAGAAGAAGCTGGCCA 785 Query 23127 ATTTGCTGGCCACGTACGTGTTGGCTGGCGGTGAG 23161 | |||||| | |||| ||| ||||| ||| Sbjct 784 ACCTGCTGGACGTGTACCGCAAGGCCGGCGGGGAG 750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135586857083664