Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_005887.1
Length=42415
Score E
Sequences producing significant alignments: (Bits) Value
seq5678 91.5 4e-14
>seq5678
Length=1680
Score = 91.5 bits (100), Expect = 4e-14
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22947 TGAAGCTACCGGACTTCGGACCGGTATCGCAGGACCGATACGCTCTGCGGCAGCTGCGCG 23006
||||||| ||||||||||| ||| | |||||||| | || | | || | | || |
Sbjct 964 TGAAGCTGCCGGACTTCGGGCCGCTGTCGCAGGATATCTGGGCCATTCAGCTGATCCGGG 905
Query 23007 AGCATGGCGCGTTGCCGCTGATCGACGCCGGTCGCTTCTGCGAGGCGGTGGCGAAGGTAT 23066
||| | | ||| ||||||||||| | | |||||| || ||||| | || |||||
Sbjct 904 AGCGTCGAGCGCTGCCGCTGATCCAGTCGGGTCGCATCGCGGAGGCCATCGCCAAGGTCC 845
Query 23067 CGAACGTATGGGCCAGTCTGCCAGGAGCCGGGTACGGGCAGCACGAAAACAAGATGGAAC 23126
||| | ||||| || ||||| || ||||| || || |||| ||| || ||| |||
Sbjct 844 GCAACATCTGGGCGAGCCTGCCGGGGGCCGGCTATGGCCAGCCCGAGAAGAAGCTGGCCA 785
Query 23127 ATTTGCTGGCCACGTACGTGTTGGCTGGCGGTGAG 23161
| |||||| | |||| ||| ||||| |||
Sbjct 784 ACCTGCTGGACGTGTACCGCAAGGCCGGCGGGGAG 750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135586857083664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |