Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq10886 84.2 3e-11
>seq10886
Length=151218
Score = 84.2 bits (92), Expect = 3e-11
Identities = 107/146 (73%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842
|||| ||| |||||||||||||| | || | || || |||||||| || |||||||
Sbjct 5401 TTCACGATACAGTGGTTAATCAGCTTCTAGCAAAGATCGATGGTGTCGAGCAATTAAATA 5342
Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902
||||| | || | |||||||| || || ||| | |||||||| || || || |||
Sbjct 5341 ATATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATTGATGAGGCCTTGTTGAGAC 5282
Query 164903 CTGGTCGATTAGAATTGAAAATAGAA 164928
|||| |||| || | ||||| |||
Sbjct 5281 CTGGCAGATTGGAGGT-AAAATTGAA 5257
Score = 82.4 bits (90), Expect = 9e-11
Identities = 144/207 (70%), Gaps = 6/207 (3%)
Strand=Plus/Minus
Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557
|||||||||| ||||| | |||||||| ||||| ||||||| ||||| || || |
Sbjct 5806 AATTAGGCTGCAAACACGTGAAAGGAATCTTATTGTATGGACCACCTGGCACGGGAAAGA 5747
Query 164558 CATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTA 164614
||||||||||||| || | ||| | |||||| | || ||| || ||||| |
Sbjct 5746 CATTAATGGCTCGGCAAATAG-GAAAGATGTTAAATTCAAGGGAGCCG--AAGATTGTAA 5690
Query 164615 ATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGT 164674
|||| || | | ||| | || || || || ||| |||||||| |||||| | |
Sbjct 5689 ATGGCCCACAGATTTTGGATAAGTACGTTGGGGAGAGTGAAGCTAACATTAGAAGACTAT 5630
Query 164675 TTCAGGAGGCTGAAGAAGAACAAAAGA 164701
| || || ||||| ||| ||||||
Sbjct 5629 TCGCAGATGCGGAAGAGGAAGAAAAGA 5603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595781606217600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |