Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq10886 84.2 3e-11 >seq10886 Length=151218 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/146 (73%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||| ||| |||||||||||||| | || | || || |||||||| || ||||||| Sbjct 5401 TTCACGATACAGTGGTTAATCAGCTTCTAGCAAAGATCGATGGTGTCGAGCAATTAAATA 5342 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 ||||| | || | |||||||| || || ||| | |||||||| || || || ||| Sbjct 5341 ATATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATTGATGAGGCCTTGTTGAGAC 5282 Query 164903 CTGGTCGATTAGAATTGAAAATAGAA 164928 |||| |||| || | ||||| ||| Sbjct 5281 CTGGCAGATTGGAGGT-AAAATTGAA 5257 Score = 82.4 bits (90), Expect = 9e-11 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 |||||||||| ||||| | |||||||| ||||| ||||||| ||||| || || | Sbjct 5806 AATTAGGCTGCAAACACGTGAAAGGAATCTTATTGTATGGACCACCTGGCACGGGAAAGA 5747 Query 164558 CATTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTA 164614 ||||||||||||| || | ||| | |||||| | || ||| || ||||| | Sbjct 5746 CATTAATGGCTCGGCAAATAG-GAAAGATGTTAAATTCAAGGGAGCCG--AAGATTGTAA 5690 Query 164615 ATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGT 164674 |||| || | | ||| | || || || || ||| |||||||| |||||| | | Sbjct 5689 ATGGCCCACAGATTTTGGATAAGTACGTTGGGGAGAGTGAAGCTAACATTAGAAGACTAT 5630 Query 164675 TTCAGGAGGCTGAAGAAGAACAAAAGA 164701 | || || ||||| ||| |||||| Sbjct 5629 TCGCAGATGCGGAAGAGGAAGAAAAGA 5603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595781606217600