Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq11325 122 2e-23 seq11060 114 3e-21 seq11119 113 9e-21 seq2754 109 1e-19 seq9991 100 6e-17 seq834 100 6e-17 seq11720 98.7 2e-16 seq206 96.9 7e-16 seq3855 95.1 2e-15 seq2388 95.1 2e-15 seq1185 93.3 8e-15 seq2738 91.5 3e-14 seq67 91.5 3e-14 seq11077 89.7 1e-13 seq5973 89.7 1e-13 seq841 89.7 1e-13 seq736 89.7 1e-13 seq1 89.7 1e-13 seq10840 87.8 4e-13 seq4247 86.0 1e-12 seq11256 84.2 4e-12 seq1075 84.2 4e-12 seq1624 82.4 1e-11 seq992 82.4 1e-11 seq10711 80.6 5e-11 seq1850 80.6 5e-11 seq1007 80.6 5e-11 >seq11325 Length=15286 Score = 122 bits (134), Expect = 2e-23 Identities = 165/224 (74%), Gaps = 11/224 (5%) Strand=Plus/Plus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436 |||||||| || || || ||||| ||| ||| | |||||||| |||| |||||| | | Sbjct 14693 GATCATTGCCATTTAACCGGTAAATACCGAGGTTCTGCACATTCAAAT--TGTAACTTAA 14750 Query 3437 ATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCC 3496 ||||| |||| || |||| || | || ||||| |||||||| ||||||||||| | Sbjct 14751 ATTATAAAAATTCAT--ATTA---CATTAGTTTTTCACAATTTATCAGGCTATGATTCAC 14805 Query 3497 ACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCA 3556 | || |||||||| |||| || | || ||||||||| || || ||||| || | Sbjct 14806 ATTTTATAATTAAAGAAATAGCAACCGCGTTCGAAGGTGAAGTTAATTTGCTACCAAT-A 14864 Query 3557 ATAAAG-AACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 | |||| || ||||||||||| || ||| |||||| |||| Sbjct 14865 ACAAAGAAAAAGTACATTTCTTTTACCAAAACCGTTAAAGATAC 14908 >seq11060 Length=60205 Score = 114 bits (126), Expect = 3e-21 Identities = 289/434 (67%), Gaps = 8/434 (2%) Strand=Plus/Plus Query 4621 GCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAG 4680 || || || || || || ||||| || || ||||| |||||||| || || || || || Sbjct 41261 GCGAAAAACGATTTTGAGAAAAATTTGTACAAATTGATGAATAACGCCGTATTCGGGAAA 41320 Query 4681 ACGATGGAGAATGTACGAAAATATAAAGATATATATTTAAGAACAAAGTGGCAAAGTCAA 4740 || ||||| ||| | || || ||| ||| || | | ||||| ||| || ||| | Sbjct 41321 ACTATGGAAAATATGCGGAATCATATCGATGTAAAACTTTTGACAAAATGGAAAGGTCGA 41380 Query 4741 TACAATGTATCGGATTTAGTATGTAGACCAAACTTCCACAGCCTTACAATTTTTGATGAG 4800 ||| | | | || || | || | ||||||| |||| | ||| |||||| || Sbjct 41381 TACGACGAAGAGGCAATAATCGCTAAAGCAAACTTTTACAGTCGTACTATTTTTTCAGAA 41440 Query 4801 GATATGGTTATAGTTGAACTTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTA 4860 || | || |||||| |||| || || |||||||||||||| |||||| Sbjct 41441 AATTTAATTGCCACCGAACTTCGAAAACTTAAGGTGAAATTCAACAAGCCGATTTATGTA 41500 Query 4861 GGGTTTAGTATATTAGATTTATCTAAAATTTATATTTATGACTTTCATTACAATT--ATG 4918 || | |||||||||| |||| ||||||| | ||||| ||||||||| | | ||| Sbjct 41501 GGTATGTGTATATTAGACATATCGAAAATTTGCTTGTATGAATTTCATTACGAGTACATG 41560 Query 4919 TTA-TGCAAAATTATGTAAATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATT 4977 || || | ||| | | || ||| | ||||||| || || |||||||| || Sbjct 41561 CTACCGCTGTACCATG---ACAAATCTAAAGTGATGTACACAGATACTGATAGTCTCATG 41617 Query 4978 TACCAATTTAATGTACCCAACATCTATGAAGACATCAAACGTGATATTTCAAGGTTTGAT 5037 || | || | || | || | |||||| | || ||| | ||||| ||||||| || Sbjct 41618 TATC-ATCGAGTG-CGACGACGTATATGAAAATATAAAATGCGATATCACAAGGTTCGAC 41675 Query 5038 ACCTCCAATTACCC 5051 || |||||| || Sbjct 41676 ACGAGCAATTATCC 41689 >seq11119 Length=22307 Score = 113 bits (124), Expect = 9e-21 Identities = 164/225 (73%), Gaps = 9/225 (4%) Strand=Plus/Plus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436 ||||||||| | || || |||| ||| ||| | |||||||| |||| |||||| | | Sbjct 19261 GATCATTGTTATTTAACCAGTAAATACCGAGGTCCTGCACATTCAAAT--TGTAACTTAA 19318 Query 3437 ATTATCAAAAATCTACCATTA--TCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTC 3494 |||| ||||||| | |||| | ||| | | ||||| |||||||| ||||| ||||| Sbjct 19319 ATTA-CAAAAATTCAT-ATTACATTCCAATAATTTTTCACAATTTATCAGGCTACGATTC 19376 Query 3495 CCACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGAT 3554 || || |||||||| |||| || | ||| ||||||| || |||||||| || Sbjct 19377 ACATTTTATAATTAAAGAAATAGCAACCGCATTCGAAGGTGGCGTTAGTTTACTACCAAT 19436 Query 3555 CAATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 | ||| || || |||||||||| || ||| | ||| || |||| Sbjct 19437 AACAAAAAAAAGT-ACATTTCTTTTACCAAAATTGTTGAAGATAC 19480 >seq2754 Length=6842 Score = 109 bits (120), Expect = 1e-19 Identities = 256/379 (68%), Gaps = 13/379 (3%) Strand=Plus/Plus Query 4541 AAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAA--ATCATATATCGATAA 4598 ||||||||| || || |||||| |||| | ||||||| | || ||||| | ||| Sbjct 3189 AAATACACCGTGTGTTACAATTTGTTTAATCCGCCTGGCTCCACGATTATATAGGGGTAA 3248 Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658 | || || ||| | || || || || || ||||||||||| || ||||||||||| Sbjct 3249 CAC-ACA--ATTCCGTACCCTCGCCAAAAACGAATTCGAAAAAAATTTATATAAATTAAT 3305 Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAAAGATATATATTT 4718 |||||| || || || ||||| || ||||||||||| || || || ||| || | | Sbjct 3306 GAATAACGCTGTATTCGGAAAAACTATGGAGAATGTGCGCAATTACGTCGATGTAAAACT 3365 Query 4719 AAGAACAAAGTGGCAAAGTCAATACAATGTATCGGATTTAG---TATGTAGACCAAACTT 4775 ||||||||| | | | |||| | | |||| | || | | || ||| || | Sbjct 3366 TTTGACAAAGTGGGCAGGACGATACGACG---CGGAGTCAGTGATCTCTAAACCGAATTA 3422 Query 4776 CCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAACT-TAAAAAAGCTAGAG 4834 ||||||| || | ||||| || || | | || ||||| |||| | ||| Sbjct 3423 TCACAGCCGTAGTACTTTTGCGGAAAATTTAATCGCCGTCGAACTCCGAAAACACGAGA- 3481 Query 4835 TTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATTTATCTAAAATTTATA 4894 | ||||||||| ||| |||||||| | ||||| |||| |||| ||||| || Sbjct 3482 TAAAATTCAACAAGTTGATTTATGTAGGTATGTGTATACTAGACATATCGAAAATCTAAT 3541 Query 4895 TTTATGACTTTCATTACAA 4913 | || || ||||| |||| Sbjct 3542 TGTACGAATTTCACCACAA 3560 >seq9991 Length=43673 Score = 100 bits (110), Expect = 6e-17 Identities = 199/290 (69%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 7199 TGTCTTTATCTATTACCACAAATCCATATTTATT---CCAACATGCCGAGCATAAATCTC 7255 |||| |||||||| || | ||||||||| || || |||||| ||||| | | Sbjct 29666 TGTCCTTATCTATCACTAAAAATCCATACTTTTTTTGCCAACAAATATGACATAATTTGC 29725 Query 7256 TGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCA 7315 | || | || | ||||| |||| |||||||| | ||| |||||||||||| Sbjct 29726 TAAAATCTTCATAAGATATGTCGATATT-ACATGATCGTTATACGCATGCTTCAGATTGG 29784 Query 7316 TTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTA 7375 | ||||||| ||| | | || || ||||| || || | | || ||||| |||| Sbjct 29785 TACCATCTTGCTTGAATAAAATTAGCAAATTTGCGTTGTCGCGTGTAAGATGCTTCGGTA 29844 Query 7376 TTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCA-TGCAG 7434 || | ||| | |||||| |||||||||| ||| |||||| ||||||| | | |||| Sbjct 29845 TTTTAGCATACGCTTGACAAAGATAGAAGCAGTCGACATCCACGTGTCGATCTATTGCA- 29903 Query 7435 AAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAATAT 7484 || || | | || ||| || || ||||| || ||||| ||||| || Sbjct 29904 AAGTAATCACTTATCGTATCTTGCTTGTCACATGCCACATCATCAAAGAT 29953 >seq834 Length=4160 Score = 100 bits (110), Expect = 6e-17 Identities = 159/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Plus Query 3378 TGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAA 3437 |||||||||||| | || ||| ||| | | | | || ||| || || ||| | Sbjct 3460 TGATCATTGTCATCTAACCGGTCGTTACCGCGGTCCCGCGCATTCTTCTTGCAACTTATT 3519 Query 3438 TTATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCC 3496 ||||| ||| | || ||| || || || ||||| |||||||||||||| || |||| | Sbjct 3520 TTATCGAAA-TGTATCATACATACCGGTAGTCTTCCATAATTTATCCGGATACGATT--C 3576 Query 3497 ACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCA 3556 | || || |||||| |||| ||| ||||| |||| ||||| || |||| |||| Sbjct 3577 ATTTTATTATTAAGGAAATAGCGACAATATTTAAAGGAAAAATTGACTTGTTACCCATCA 3636 Query 3557 ATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 |||||| | |||||||| |||||||||| || | || ||| Sbjct 3637 CAAAAGAAAG-TACATTTCATTCACAAAATATGTCATAAGTAC 3678 >seq11720 Length=11563 Score = 98.7 bits (108), Expect = 2e-16 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598 ||| ||||||| || || ||||| | |||||| | |||| ||| || || Sbjct 3052 GAAGATACACCGCGTATTAAAATTGGCGCAATCTCCATAGCTCTGTAAATACATAGAATT 3111 Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658 ||| || || ||||| | ||||| ||||| || ||||||||||| ||||||||||| Sbjct 3112 AAACACGCAATTCCGAACTCGCGCTAAAAATGATTTTGAAAAAAACTTGTATAAATTAAT 3171 Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700 ||| || ||||| || ||||| || ||||||||||| || || Sbjct 3172 GAACAACGCGGTATTCGGAAAAACCATGGAGAATGTGCGTAA 3213 Score = 98.7 bits (108), Expect = 2e-16 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 4627 AATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATG 4686 ||||| |||||||||||||| ||||||||||||||||||||||| ||||| || || ||| Sbjct 10632 AATGATTTCGAAAAAAACTTGTATAAATTAATGAATAATGCGGTGTTTGGTAAAACTATG 10691 Query 4687 GAGAATGTACGAAA 4700 |||||||| || || Sbjct 10692 GAGAATGTGCGCAA 10705 >seq206 Length=9822 Score = 96.9 bits (106), Expect = 7e-16 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 4618 CTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGA 4677 || || || ||| | |||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 7633 CTCGCCAAAAATAATTTCGAAAAAAACTTGTATAAATTAATGAATAATGCGGTGTTTGGT 7692 Query 4678 AAGACGATGGAGAATGTACGAAA 4700 || || ||||||||||| || || Sbjct 7693 AAAACCATGGAGAATGTGCGCAA 7715 >seq3855 Length=12639 Score = 95.1 bits (104), Expect = 2e-15 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598 ||||||||||| || || ||||| | |||||| || || | ||| || || Sbjct 11859 GAAAATACACCGCGTGTTAAAATTCGCGCAATCTCCATGACTTTATAGATACATAGAGTT 11800 Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658 |||||| || ||| | || ||||| | ||| || ||||| || || ||||||||||| Sbjct 11799 AAATACACAATTCCGGACCCTCGCTAAAAGTGATTTTGAAAAGAATTTATATAAATTAAT 11740 Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700 ||| ||||| ||||| ||||| || ||||| || ||||| || Sbjct 11739 GAACAATGCAGTTTTCGGAAAAACAATGGAAAACGTACGCAA 11698 >seq2388 Length=10756 Score = 95.1 bits (104), Expect = 2e-15 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 7957 GCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGC 8016 ||| || ||||||| || |||||||| ||| | | |||||||||||||| | | Sbjct 6524 GCTTCCTTTTGAACTGCATATACCAGGATATTAATTTTGCGGTCCGGGTACTCGGCTGAA 6465 Query 8017 CAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACA 8076 ||| |||| ||| |||| ||| |||||| ||||| |||||||| |||||| ||||| Sbjct 6464 AAAGTGATTGGCTAGAGGCGATCGAGGTATTAATCCGTTGGACGCGGCGTGTCGCGAACA 6405 Query 8077 CGATATAGCTTACTC 8091 ||| || || ||||| Sbjct 6404 CGACATTGCGTACTC 6390 >seq1185 Length=8388 Score = 93.3 bits (102), Expect = 8e-15 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 4612 CGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTT 4671 |||| || || || || || ||| |||||||||| ||||||||||||||||||||||| Sbjct 2769 CGAACCCTCGCCAAAAACGATTTCAAAAAAAACTTGTATAAATTAATGAATAATGCGGTG 2828 Query 4672 TTTGGAAAGACGATGGAGAATGTACGAAA 4700 ||||| || || ||||||||||| || || Sbjct 2829 TTTGGTAAAACAATGGAGAATGTGCGCAA 2857 >seq2738 Length=10643 Score = 91.5 bits (100), Expect = 3e-14 Identities = 121/167 (72%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 7931 GGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAG 7990 |||||||| || | || ||| ||| || | || || || || || || |||||| Sbjct 624 GGTTTGTTAAATCGCTTGATAAACGCGCTTCCTTTCGAGCTACATATCCCTGGATATCAG 565 Query 7991 TACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAAT 8050 | ||||||||||| ||| | ||| || ||||||| |||| ||| ||| ||||| Sbjct 564 TTTTGCGGTCCGGGAACACACTTAAAAAAATGATTAGCCAGAGGCGATCAGGGTGTAAAT 505 Query 8051 CCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTA--CTCAAAA 8095 || |||||||| ||||| ||||||||||| ||||| ||||||| Sbjct 504 CCATTGGACGCAGCGTGCCGCGAACACGATATTGCTTATTCTCAAAA 458 >seq67 Length=4817 Score = 91.5 bits (100), Expect = 3e-14 Identities = 246/367 (67%), Gaps = 12/367 (3%) Strand=Plus/Minus Query 4340 TAGGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAG 4399 |||| ||||| || ||||| ||||| | ||||| | || | || |||| ||||| | Sbjct 371 TAGGGTACATTCTCGAAGTTGATCTGGAGTATCCGCAACATCTGCACGATCGACACACTG 312 Query 4400 ATCTACCTTTATGCCCA--GAACATTTTGTACCACCTGGTA-GCAAGCAACAAAAACTCA 4456 ||||||| || ||||| | || | | || ||||| | || || || | ||||| Sbjct 311 ATCTACCGTTCTGCCCGACGCGCAATAAG--CCGCCTGGCAAGCGAG-AATATAAACTTT 255 Query 4457 CGACAACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTT 4516 | || || |||||||||| || || ||||| ||| |||||| | ||||| Sbjct 254 TAGCGACCTTGCACGATAAAAAGCGGTACGTCATTCATTATTGCAATTTGCAGCAATGCA 195 Query 4517 TAGATTTAGGTTTAGTTCTTAAGAAA-ATACACCTAGTCTTGAAATTTGAGCAATCAGAC 4575 | ||| | | ||| | ||||||| || || |||||| ||||| | Sbjct 194 CTCGTCACGGTCTCCG-CGTAATACGGATACACCGTGTATTACAATTTGTTCAATCCGCT 136 Query 4576 TGGCTCA--AATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGT 4633 |||||| ||| ||| | | |||| | || | | || | | || || || || | Sbjct 135 TGGCTCCGCAATTATACAGAGTTAAACACACAGTTT--CGTACCTTCGCGAAAAACGATT 78 Query 4634 TCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATG 4693 |||| ||||| || |||||||||||||||||||| || || ||||| || ||||| ||| Sbjct 77 TCGAGAAAAATTTATATAAATTAATGAATAATGCCGTATTCGGAAAAACTATGGAAAATT 18 Query 4694 TACGAAA 4700 |||| || Sbjct 17 TACGCAA 11 >seq11077 Length=71718 Score = 89.7 bits (98), Expect = 1e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 17345 ATAACTGGTTTCATGAGTTTCGTAAATACATATGGGCTCTCACAGAGCCCAAAAAGTAAG 17404 ||||||| ||| || | ||| ||||| ||||| || || || | ||||| |||| Sbjct 68988 ATAACTGATTTTATTATTTTTGTAAAAACATAGGGACTGGTGCATAAGCCAAACGGTAAA 68929 Query 17405 CACGTAAATTCATATAACTGGGCCTGGAATCTAAATTTGAAATATTTTCTATTACTTTTG 17464 || ||||||| |||||| | || ||||||| | |||| ||||||||||| ||| Sbjct 68928 CATGTAAATTGATATAATTTATCCGAAAATCTAACTCTGAAGAATTTTCTATTATTTTCT 68869 Query 17465 TGTATCGGTATCGCGAAATATGCGTCTTT 17493 ||||||| ||| | |||||||||| || Sbjct 68868 CGTATCGGGATCAAGTAATATGCGTCCTT 68840 >seq5973 Length=4785 Score = 89.7 bits (98), Expect = 1e-13 Identities = 194/287 (68%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 7196 CACTGTCTTTATCTATTACCACAAATCCATATTTA---TTCCAACATGC-CGAGCATAAA 7251 ||||||| || ||||| || | ||||||||| | | | |||| | | ||| ||||| Sbjct 1977 CACTGTCCTTGTCTATCACTAAAAATCCATAATCACGCTGCCAAAAATCGCGA-CATAAT 1919 Query 7252 TCTCTGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGA 7311 || | || | |||| |||||| || || || |||| || | || |||| Sbjct 1918 TCGTTAAAATCATCATATGACATGTCGGTGTTTACGTGATG----TACACGTGTTTCAAG 1863 Query 7312 TTCATTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTG 7371 || | |||||||| |||||| | || ||||| || || || | || || | ||| Sbjct 1862 TTGGTATCATCTTGTTTGAACAGGATCAGCAAGTTCGCTTTGTCGCGTATAAGATATTTG 1803 Query 7372 GGTATTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATG 7431 ||||||| || || | ||| ||||||| |||| ||| | || | |||||||||||| Sbjct 1802 GGTATTCTTGCGTATGACTGATAGAGATAAAAGCAGTCGATATTCGAGTGTCGACCCATT 1743 Query 7432 CAGAAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTC 7478 | ||| | || | | | |||||| || || || ||||| || || Sbjct 1742 GAAAAATATTCTCTCACGACATCCTGCTTATCGCACGCAACGTCATC 1696 >seq841 Length=6255 Score = 89.7 bits (98), Expect = 1e-13 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436 |||||||| || | || ||||| || | | | | |||||| |||| ||||| | | Sbjct 1210 GATCATTGCCATCTGACCGGTAAATATCGTGGTCCCGCACATTCAAAT--TGTAATCTAA 1153 Query 3437 ATTATCAAAAATC-TACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCC 3495 |||| |||| || || | || ||| | || ||||| |||||||| | ||| ||||| Sbjct 1152 CTTATAAAAATTCATATTAC-ATTCCAATAGTTTTTCACAATTTATCAGACTACGATTCA 1094 Query 3496 CACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATC 3555 || || ||||| || |||| || || |||||||||| | || ||||| || Sbjct 1093 CATTTTATAATAAAAAAAATAGCAACCGTGTTTGAAGGTGGCGTCAGTTTGCTACCAATA 1034 Query 3556 AATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 | |||||| ||||||||||| || ||| | ||| ||||||| Sbjct 1033 ACAAAAGAAAAATACATTTCTTTTACCAAAATTGTTGAAAATAC 990 >seq736 Length=9941 Score = 89.7 bits (98), Expect = 1e-13 Identities = 157/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436 |||||||||||| | || |||| || ||| | | || ||| |||| |||||| | | Sbjct 3714 GATCATTGTCACATAACCGGTAGATATCGAGGTCCCGCGCATTCAAAT--TGTAACCTAA 3771 Query 3437 ATTATCAAAAATC-TACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCC 3495 |||| |||| || || | || ||||| || ||||| |||||||| ||||| |||| Sbjct 3772 GTTATAAAAATTCGTATTA-CATTCCAGTAGTTTTTCACAATTTATCAGGCTACAATTCA 3830 Query 3496 CACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATC 3555 || || ||||| || |||| || || || ||||||| || | |||| || Sbjct 3831 CATTTTATAATAAAAGAAATAGCAACCGTGTTCGAAGGTGGCATCAATCTGCTACTAATA 3890 Query 3556 AATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 | |||||| ||||||||||| || ||| | ||| || |||| Sbjct 3891 ACAAAAGAAAAGTACATTTCTTTTACCAAAATTGTTGAAGATAC 3934 >seq1 Length=3068 Score = 89.7 bits (98), Expect = 1e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 4618 CTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGA 4677 || || || ||||| |||||||||||||| ||||| || |||||||||||||| ||||| Sbjct 1413 CTCGCCAAAAATGATTTCGAAAAAAACTTGTATAAGTTGATGAATAATGCGGTGTTTGGT 1354 Query 4678 AAGACGATGGAGAATGT 4694 || || ||||||||||| Sbjct 1353 AAAACAATGGAGAATGT 1337 >seq10840 Length=94547 Score = 87.8 bits (96), Expect = 4e-13 Identities = 154/222 (69%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAAT 3438 |||||||| ||| | ||||||| || ||| | | || ||| | || || | ||| Sbjct 14118 GATCATTGCCACATAACGGGTAGATATCGAGGTCCCGCGCATTCAATTTGCAATTTAAAT 14177 Query 3439 TATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCCA 3497 ||| || ||| || | || || | || ||||| |||||||||||||||||| | || Sbjct 14178 TATAAACAAT-TATTTTACATTCCGATAGTATTTCACAATTTATCCGGCTATGATGCGCA 14236 Query 3498 CTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCAA 3557 || || |||||| | || |||| || |||| |||| ||||| || || | Sbjct 14237 TTTTATTATTAAGGAGATGGCAACAGCGTTCAAAGGGAAAATCGACTTACTTCCAATTAC 14296 Query 3558 TAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599 ||||||| |||||||| || || |||| ||| ||||||| Sbjct 14297 TAAAGAAAAATACATTTCGTTTACTAAATATGTTCAAAATAC 14338 >seq4247 Length=6568 Score = 86.0 bits (94), Expect = 1e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 7957 GCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGC 8016 ||| || ||||||| || ||||| || ||||| | |||||||||||||| || || Sbjct 6329 GCTTCCTTTTGAACTGCATATACCTGGATATCAATTTTGCGGTCCGGGTACTAAACTAAA 6270 Query 8017 CAAGAGATTAGCTCGAGGTGATTCAGG-TATAAATCCTTTGGACGCTGCGTGTAAGGAAC 8075 ||| |||| || |||| || ||||| ||| ||||| |||||||| |||||| |||| Sbjct 6269 AAAGCGATTGGCCAGAGGCGA-TCAGGATATTAATCCGTTGGACGCGGCGTGTCGCGAAC 6211 Query 8076 ACGA 8079 |||| Sbjct 6210 ACGA 6207 >seq11256 Length=6468 Score = 84.2 bits (92), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAAT 3438 |||||||| || || || ||| ||| | | | ||||| || |||||| | ||| Sbjct 3227 GATCATTGCCATTTGACTGGTCGTTACCGCGGTCCTGCATATTCTATCTGTAATTTAAAT 3168 Query 3439 TATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCCA 3497 |||| ||| | || ||| || |||||| | ||| |||||||||| || || ||||| || Sbjct 3167 TATCGAAA-TGTATCATACATGCCAGTTATTTTTTATAATTTATCTGGATACGATTCGCA 3109 Query 3498 CTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCAA 3557 ||||| |||||| ||||||||| || || | | | |||| || | || Sbjct 3108 TTTCATTATTAAGGAAATAGCTACAGCGTTCAAAAAGAAGACTGACGTACTCCCCACCAC 3049 Query 3558 TAAAGAACGTTACATTTCTTTCACAAAA 3585 |||||| ||||||||||| |||||| Sbjct 3048 GAAAGAAAAGTACATTTCTTTTACAAAA 3021 >seq1075 Length=13836 Score = 84.2 bits (92), Expect = 4e-12 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 7266 GTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTG 7325 ||| | |||||| ||||| | ||||| | || |||||| ||||| || ||| || Sbjct 10475 GTAAGACATGTCGGTATTTATGTGATCGTTGTACGCATGCTTTAGATTGATAATATCCTG 10534 Query 7326 ACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATA 7385 ||| | | || || || || || || | || || || || ||||| || ||| Sbjct 10535 CTTGAATAAAATTAGCAAATTCGCGTTGTCGCGTATAAGATGTTTCGGTATCTTTGCATA 10594 Query 7386 AGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAG-CTT 7444 || |||||||||||||||| |||||||||| ||||| | |||| | |||| || || Sbjct 10595 CGTCTGACAGAGATAGAAGCAGTCAACATCCATGTGTTGTTCCAT-TATAAAATAGTCTC 10653 Query 7445 TGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAATAT 7484 | || ||| | || ||||| || || || ||||| || Sbjct 10654 TTATCGTATCTTACTTGTCACATGCCACGTCATCAAAGAT 10693 >seq1624 Length=11204 Score = 82.4 bits (90), Expect = 1e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 7967 GAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTA 8026 ||||| || || || ||||| |||| |||||||||||||| | ||| |||| Sbjct 10870 GAACTACATATTCCCGGTTACCAGTTTTGCGGTCCGGGTACTCGACTGAAAAAGCGATTG 10811 Query 8027 GCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCT 8086 ||| ||||||| |||||||||||| | ||||| |||||| |||||||| || || Sbjct 10810 GCTAGAGGTGACCGAGGTATAAATCCGCTCGACGCGGCGTGTCGCGAACACGACATTGCG 10751 Query 8087 TACTC 8091 ||||| Sbjct 10750 TACTC 10746 >seq992 Length=6016 Score = 82.4 bits (90), Expect = 1e-11 Identities = 203/305 (67%), Gaps = 5/305 (2%) Strand=Plus/Plus Query 7177 TACCTACCACTCTTCAATTCACTGTCTTTATCTATTACCACAAATCCATATTTA---TTC 7233 || ||||| | |||| ||||||| ||||| |||||||| || || || || | | Sbjct 4517 TATCTACCGTTTCTCAACGCACTGTCCTTATCGATTACCACGAAACCGTACTTTCGCTGC 4576 Query 7234 CAACATGCCGAGCATAAATCTCTGAATGAGTTGTATGGCATGTCCGTATTGACATGATCA 7293 ||||| | || || || | | || | ||| | |||||| || || || | ||| Sbjct 4577 CAACACTC-GA-CACAATGCGCAAAAATCCTCGTACGACATGTCGGTGTTCACGTCATCG 4634 Query 7294 TCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTA 7353 | | | |||| |||| || | || || || || |||| || | | |||||| || Sbjct 4635 TTGTGCACATGCCTCAGGTTGGTGTCGTCCTGTCGAAACAAAACCAAGAGGTTTGCGTTG 4694 Query 7354 TCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACA 7413 || | |||||||| || ||||| | || || ||||||||||| || | || || Sbjct 4695 TCCCGTATCAGGTGTTTCGGTATCTTGGCGTACGTCTGACAGAGATAAAAACAATCGACG 4754 Query 7414 TCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACA 7473 | | |||||||||||| | ||| | || |||| || ||| || || ||||| || Sbjct 4755 TTCGAATGTCGACCCATGGAAAAATACTCTCTGATTGTATTCTGGTTGTCGCAAGCTACG 4814 Query 7474 TCGTC 7478 || || Sbjct 4815 TCATC 4819 >seq10711 Length=17636 Score = 80.6 bits (88), Expect = 5e-11 Identities = 126/176 (72%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 3413 CTGCACATAAATCCTGTAACGTTAATTATCAAAAATCTACCATT-ATCCCAGTTGTCTTT 3471 |||||||| | ||| || | ||||||||||| | || ||| || |||||| | ||| Sbjct 12004 CTGCACATTATCTCTGCAATCTAAATTATCAAAA-TGTATCATACATGCCAGTTATTTTT 11946 Query 3472 CATAATTTATCCGGCTATGATTCCCACTTCATAATTAAGTCCTTAGCTACAGTATTTGAA 3531 || |||||||| || || ||||| || ||||| ||||| |||| || || || Sbjct 11945 CACAATTTATCTGGATACGATTCGCATTTCATTATTAAAGAAATAGCCACGACGTTCAAA 11886 Query 3532 GGTGAAATTTCAT--TACTACCGATCAATAAAGAACGTTACATTTCTTTCACAAAA 3585 || ||| | || |||| || |||| |||||| ||||||||||| |||||| Sbjct 11885 GG--AAAGTCCAACGTACTCCCCATCACAAAAGAAAAGTACATTTCTTTTACAAAA 11832 >seq1850 Length=13327 Score = 80.6 bits (88), Expect = 5e-11 Identities = 96/124 (77%), Gaps = 6/124 (5%) Strand=Plus/Plus Query 7972 TCACATA--CCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCT 8029 ||||||| ||||| ||||||| ||||||||||| || | | | || |||| || Sbjct 11606 TCACATATCCCAGGATATCAGTTTTGCGGTCCGGGAACGCACCTGGGAAAACAATTA-CT 11664 Query 8030 C-GAGGTGATTCAG-GTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTT 8087 | |||| ||| ||| |||||||||| || |||| |||||| | || ||||||||||||| Sbjct 11665 CAGAGGCGAT-CAGAGTATAAATCCGTTACACGCAGCGTGTCACGAGCACGATATAGCTT 11723 Query 8088 ACTC 8091 |||| Sbjct 11724 ACTC 11727 >seq1007 Length=9575 Score = 80.6 bits (88), Expect = 5e-11 Identities = 97/131 (74%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 7967 GAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTA 8026 || || || || || || |||||| ||| ||||||| ||| | || | ||| ||||| Sbjct 8368 GAGCTACATATCCCTGGAAATCAGTTTTGCAGTCCGGGAACACACTTGGAAAAGCGATTA 8427 Query 8027 GCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCT 8086 ||| |||| ||| |||||||||||| || |||| ||||| |||||||| || | | Sbjct 8428 GCTAGAGGCGATCAAGGTATAAATCCACTGAACGCAGCGTGCCGCGAACACGACATTGTT 8487 Query 8087 TA--CTCAAAA 8095 || ||||||| Sbjct 8488 TATTCTCAAAA 8498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97960280419344