Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq11325 122 2e-23
seq11060 114 3e-21
seq11119 113 9e-21
seq2754 109 1e-19
seq9991 100 6e-17
seq834 100 6e-17
seq11720 98.7 2e-16
seq206 96.9 7e-16
seq3855 95.1 2e-15
seq2388 95.1 2e-15
seq1185 93.3 8e-15
seq2738 91.5 3e-14
seq67 91.5 3e-14
seq11077 89.7 1e-13
seq5973 89.7 1e-13
seq841 89.7 1e-13
seq736 89.7 1e-13
seq1 89.7 1e-13
seq10840 87.8 4e-13
seq4247 86.0 1e-12
seq11256 84.2 4e-12
seq1075 84.2 4e-12
seq1624 82.4 1e-11
seq992 82.4 1e-11
seq10711 80.6 5e-11
seq1850 80.6 5e-11
seq1007 80.6 5e-11
>seq11325
Length=15286
Score = 122 bits (134), Expect = 2e-23
Identities = 165/224 (74%), Gaps = 11/224 (5%)
Strand=Plus/Plus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436
|||||||| || || || ||||| ||| ||| | |||||||| |||| |||||| | |
Sbjct 14693 GATCATTGCCATTTAACCGGTAAATACCGAGGTTCTGCACATTCAAAT--TGTAACTTAA 14750
Query 3437 ATTATCAAAAATCTACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCC 3496
||||| |||| || |||| || | || ||||| |||||||| ||||||||||| |
Sbjct 14751 ATTATAAAAATTCAT--ATTA---CATTAGTTTTTCACAATTTATCAGGCTATGATTCAC 14805
Query 3497 ACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCA 3556
| || |||||||| |||| || | || ||||||||| || || ||||| || |
Sbjct 14806 ATTTTATAATTAAAGAAATAGCAACCGCGTTCGAAGGTGAAGTTAATTTGCTACCAAT-A 14864
Query 3557 ATAAAG-AACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
| |||| || ||||||||||| || ||| |||||| ||||
Sbjct 14865 ACAAAGAAAAAGTACATTTCTTTTACCAAAACCGTTAAAGATAC 14908
>seq11060
Length=60205
Score = 114 bits (126), Expect = 3e-21
Identities = 289/434 (67%), Gaps = 8/434 (2%)
Strand=Plus/Plus
Query 4621 GCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAG 4680
|| || || || || || ||||| || || ||||| |||||||| || || || || ||
Sbjct 41261 GCGAAAAACGATTTTGAGAAAAATTTGTACAAATTGATGAATAACGCCGTATTCGGGAAA 41320
Query 4681 ACGATGGAGAATGTACGAAAATATAAAGATATATATTTAAGAACAAAGTGGCAAAGTCAA 4740
|| ||||| ||| | || || ||| ||| || | | ||||| ||| || ||| |
Sbjct 41321 ACTATGGAAAATATGCGGAATCATATCGATGTAAAACTTTTGACAAAATGGAAAGGTCGA 41380
Query 4741 TACAATGTATCGGATTTAGTATGTAGACCAAACTTCCACAGCCTTACAATTTTTGATGAG 4800
||| | | | || || | || | ||||||| |||| | ||| |||||| ||
Sbjct 41381 TACGACGAAGAGGCAATAATCGCTAAAGCAAACTTTTACAGTCGTACTATTTTTTCAGAA 41440
Query 4801 GATATGGTTATAGTTGAACTTAAAAAAGCTAGAGTTTGCTTCAACAAGCCGATCTATGTA 4860
|| | || |||||| |||| || || |||||||||||||| ||||||
Sbjct 41441 AATTTAATTGCCACCGAACTTCGAAAACTTAAGGTGAAATTCAACAAGCCGATTTATGTA 41500
Query 4861 GGGTTTAGTATATTAGATTTATCTAAAATTTATATTTATGACTTTCATTACAATT--ATG 4918
|| | |||||||||| |||| ||||||| | ||||| ||||||||| | | |||
Sbjct 41501 GGTATGTGTATATTAGACATATCGAAAATTTGCTTGTATGAATTTCATTACGAGTACATG 41560
Query 4919 TTA-TGCAAAATTATGTAAATACCTCAAAATTATTGTACACTGACACAGATAGTCTAATT 4977
|| || | ||| | | || ||| | ||||||| || || |||||||| ||
Sbjct 41561 CTACCGCTGTACCATG---ACAAATCTAAAGTGATGTACACAGATACTGATAGTCTCATG 41617
Query 4978 TACCAATTTAATGTACCCAACATCTATGAAGACATCAAACGTGATATTTCAAGGTTTGAT 5037
|| | || | || | || | |||||| | || ||| | ||||| ||||||| ||
Sbjct 41618 TATC-ATCGAGTG-CGACGACGTATATGAAAATATAAAATGCGATATCACAAGGTTCGAC 41675
Query 5038 ACCTCCAATTACCC 5051
|| |||||| ||
Sbjct 41676 ACGAGCAATTATCC 41689
>seq11119
Length=22307
Score = 113 bits (124), Expect = 9e-21
Identities = 164/225 (73%), Gaps = 9/225 (4%)
Strand=Plus/Plus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436
||||||||| | || || |||| ||| ||| | |||||||| |||| |||||| | |
Sbjct 19261 GATCATTGTTATTTAACCAGTAAATACCGAGGTCCTGCACATTCAAAT--TGTAACTTAA 19318
Query 3437 ATTATCAAAAATCTACCATTA--TCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTC 3494
|||| ||||||| | |||| | ||| | | ||||| |||||||| ||||| |||||
Sbjct 19319 ATTA-CAAAAATTCAT-ATTACATTCCAATAATTTTTCACAATTTATCAGGCTACGATTC 19376
Query 3495 CCACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGAT 3554
|| || |||||||| |||| || | ||| ||||||| || |||||||| ||
Sbjct 19377 ACATTTTATAATTAAAGAAATAGCAACCGCATTCGAAGGTGGCGTTAGTTTACTACCAAT 19436
Query 3555 CAATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
| ||| || || |||||||||| || ||| | ||| || ||||
Sbjct 19437 AACAAAAAAAAGT-ACATTTCTTTTACCAAAATTGTTGAAGATAC 19480
>seq2754
Length=6842
Score = 109 bits (120), Expect = 1e-19
Identities = 256/379 (68%), Gaps = 13/379 (3%)
Strand=Plus/Plus
Query 4541 AAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAA--ATCATATATCGATAA 4598
||||||||| || || |||||| |||| | ||||||| | || ||||| | |||
Sbjct 3189 AAATACACCGTGTGTTACAATTTGTTTAATCCGCCTGGCTCCACGATTATATAGGGGTAA 3248
Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658
| || || ||| | || || || || || ||||||||||| || |||||||||||
Sbjct 3249 CAC-ACA--ATTCCGTACCCTCGCCAAAAACGAATTCGAAAAAAATTTATATAAATTAAT 3305
Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAAAGATATATATTT 4718
|||||| || || || ||||| || ||||||||||| || || || ||| || | |
Sbjct 3306 GAATAACGCTGTATTCGGAAAAACTATGGAGAATGTGCGCAATTACGTCGATGTAAAACT 3365
Query 4719 AAGAACAAAGTGGCAAAGTCAATACAATGTATCGGATTTAG---TATGTAGACCAAACTT 4775
||||||||| | | | |||| | | |||| | || | | || ||| || |
Sbjct 3366 TTTGACAAAGTGGGCAGGACGATACGACG---CGGAGTCAGTGATCTCTAAACCGAATTA 3422
Query 4776 CCACAGCCTTACAATTTTTGATGAGGATATGGTTATAGTTGAACT-TAAAAAAGCTAGAG 4834
||||||| || | ||||| || || | | || ||||| |||| | |||
Sbjct 3423 TCACAGCCGTAGTACTTTTGCGGAAAATTTAATCGCCGTCGAACTCCGAAAACACGAGA- 3481
Query 4835 TTTGCTTCAACAAGCCGATCTATGTAGGGTTTAGTATATTAGATTTATCTAAAATTTATA 4894
| ||||||||| ||| |||||||| | ||||| |||| |||| ||||| ||
Sbjct 3482 TAAAATTCAACAAGTTGATTTATGTAGGTATGTGTATACTAGACATATCGAAAATCTAAT 3541
Query 4895 TTTATGACTTTCATTACAA 4913
| || || ||||| ||||
Sbjct 3542 TGTACGAATTTCACCACAA 3560
>seq9991
Length=43673
Score = 100 bits (110), Expect = 6e-17
Identities = 199/290 (69%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 7199 TGTCTTTATCTATTACCACAAATCCATATTTATT---CCAACATGCCGAGCATAAATCTC 7255
|||| |||||||| || | ||||||||| || || |||||| ||||| | |
Sbjct 29666 TGTCCTTATCTATCACTAAAAATCCATACTTTTTTTGCCAACAAATATGACATAATTTGC 29725
Query 7256 TGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCA 7315
| || | || | ||||| |||| |||||||| | ||| ||||||||||||
Sbjct 29726 TAAAATCTTCATAAGATATGTCGATATT-ACATGATCGTTATACGCATGCTTCAGATTGG 29784
Query 7316 TTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTA 7375
| ||||||| ||| | | || || ||||| || || | | || ||||| ||||
Sbjct 29785 TACCATCTTGCTTGAATAAAATTAGCAAATTTGCGTTGTCGCGTGTAAGATGCTTCGGTA 29844
Query 7376 TTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCA-TGCAG 7434
|| | ||| | |||||| |||||||||| ||| |||||| ||||||| | | ||||
Sbjct 29845 TTTTAGCATACGCTTGACAAAGATAGAAGCAGTCGACATCCACGTGTCGATCTATTGCA- 29903
Query 7435 AAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAATAT 7484
|| || | | || ||| || || ||||| || ||||| ||||| ||
Sbjct 29904 AAGTAATCACTTATCGTATCTTGCTTGTCACATGCCACATCATCAAAGAT 29953
>seq834
Length=4160
Score = 100 bits (110), Expect = 6e-17
Identities = 159/223 (71%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 3378 TGATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAA 3437
|||||||||||| | || ||| ||| | | | | || ||| || || ||| |
Sbjct 3460 TGATCATTGTCATCTAACCGGTCGTTACCGCGGTCCCGCGCATTCTTCTTGCAACTTATT 3519
Query 3438 TTATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCC 3496
||||| ||| | || ||| || || || ||||| |||||||||||||| || |||| |
Sbjct 3520 TTATCGAAA-TGTATCATACATACCGGTAGTCTTCCATAATTTATCCGGATACGATT--C 3576
Query 3497 ACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCA 3556
| || || |||||| |||| ||| ||||| |||| ||||| || |||| ||||
Sbjct 3577 ATTTTATTATTAAGGAAATAGCGACAATATTTAAAGGAAAAATTGACTTGTTACCCATCA 3636
Query 3557 ATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
|||||| | |||||||| |||||||||| || | || |||
Sbjct 3637 CAAAAGAAAG-TACATTTCATTCACAAAATATGTCATAAGTAC 3678
>seq11720
Length=11563
Score = 98.7 bits (108), Expect = 2e-16
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598
||| ||||||| || || ||||| | |||||| | |||| ||| || ||
Sbjct 3052 GAAGATACACCGCGTATTAAAATTGGCGCAATCTCCATAGCTCTGTAAATACATAGAATT 3111
Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658
||| || || ||||| | ||||| ||||| || ||||||||||| |||||||||||
Sbjct 3112 AAACACGCAATTCCGAACTCGCGCTAAAAATGATTTTGAAAAAAACTTGTATAAATTAAT 3171
Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700
||| || ||||| || ||||| || ||||||||||| || ||
Sbjct 3172 GAACAACGCGGTATTCGGAAAAACCATGGAGAATGTGCGTAA 3213
Score = 98.7 bits (108), Expect = 2e-16
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 4627 AATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATG 4686
||||| |||||||||||||| ||||||||||||||||||||||| ||||| || || |||
Sbjct 10632 AATGATTTCGAAAAAAACTTGTATAAATTAATGAATAATGCGGTGTTTGGTAAAACTATG 10691
Query 4687 GAGAATGTACGAAA 4700
|||||||| || ||
Sbjct 10692 GAGAATGTGCGCAA 10705
>seq206
Length=9822
Score = 96.9 bits (106), Expect = 7e-16
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 4618 CTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGA 4677
|| || || ||| | |||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 7633 CTCGCCAAAAATAATTTCGAAAAAAACTTGTATAAATTAATGAATAATGCGGTGTTTGGT 7692
Query 4678 AAGACGATGGAGAATGTACGAAA 4700
|| || ||||||||||| || ||
Sbjct 7693 AAAACCATGGAGAATGTGCGCAA 7715
>seq3855
Length=12639
Score = 95.1 bits (104), Expect = 2e-15
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598
||||||||||| || || ||||| | |||||| || || | ||| || ||
Sbjct 11859 GAAAATACACCGCGTGTTAAAATTCGCGCAATCTCCATGACTTTATAGATACATAGAGTT 11800
Query 4599 AAATACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAAT 4658
|||||| || ||| | || ||||| | ||| || ||||| || || |||||||||||
Sbjct 11799 AAATACACAATTCCGGACCCTCGCTAAAAGTGATTTTGAAAAGAATTTATATAAATTAAT 11740
Query 4659 GAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAA 4700
||| ||||| ||||| ||||| || ||||| || ||||| ||
Sbjct 11739 GAACAATGCAGTTTTCGGAAAAACAATGGAAAACGTACGCAA 11698
>seq2388
Length=10756
Score = 95.1 bits (104), Expect = 2e-15
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 7957 GCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGC 8016
||| || ||||||| || |||||||| ||| | | |||||||||||||| | |
Sbjct 6524 GCTTCCTTTTGAACTGCATATACCAGGATATTAATTTTGCGGTCCGGGTACTCGGCTGAA 6465
Query 8017 CAAGAGATTAGCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACA 8076
||| |||| ||| |||| ||| |||||| ||||| |||||||| |||||| |||||
Sbjct 6464 AAAGTGATTGGCTAGAGGCGATCGAGGTATTAATCCGTTGGACGCGGCGTGTCGCGAACA 6405
Query 8077 CGATATAGCTTACTC 8091
||| || || |||||
Sbjct 6404 CGACATTGCGTACTC 6390
>seq1185
Length=8388
Score = 93.3 bits (102), Expect = 8e-15
Identities = 74/89 (83%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 4612 CGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTT 4671
|||| || || || || || ||| |||||||||| |||||||||||||||||||||||
Sbjct 2769 CGAACCCTCGCCAAAAACGATTTCAAAAAAAACTTGTATAAATTAATGAATAATGCGGTG 2828
Query 4672 TTTGGAAAGACGATGGAGAATGTACGAAA 4700
||||| || || ||||||||||| || ||
Sbjct 2829 TTTGGTAAAACAATGGAGAATGTGCGCAA 2857
>seq2738
Length=10643
Score = 91.5 bits (100), Expect = 3e-14
Identities = 121/167 (72%), Gaps = 2/167 (1%)
Strand=Plus/Minus
Query 7931 GGTTTGTTCAACAATATAATCAACAAGCTCCCACTTGAACTTCACATACCAGGTTATCAG 7990
|||||||| || | || ||| ||| || | || || || || || || ||||||
Sbjct 624 GGTTTGTTAAATCGCTTGATAAACGCGCTTCCTTTCGAGCTACATATCCCTGGATATCAG 565
Query 7991 TACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCTCGAGGTGATTCAGGTATAAAT 8050
| ||||||||||| ||| | ||| || ||||||| |||| ||| ||| |||||
Sbjct 564 TTTTGCGGTCCGGGAACACACTTAAAAAAATGATTAGCCAGAGGCGATCAGGGTGTAAAT 505
Query 8051 CCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTTA--CTCAAAA 8095
|| |||||||| ||||| ||||||||||| ||||| |||||||
Sbjct 504 CCATTGGACGCAGCGTGCCGCGAACACGATATTGCTTATTCTCAAAA 458
>seq67
Length=4817
Score = 91.5 bits (100), Expect = 3e-14
Identities = 246/367 (67%), Gaps = 12/367 (3%)
Strand=Plus/Minus
Query 4340 TAGGCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAG 4399
|||| ||||| || ||||| ||||| | ||||| | || | || |||| ||||| |
Sbjct 371 TAGGGTACATTCTCGAAGTTGATCTGGAGTATCCGCAACATCTGCACGATCGACACACTG 312
Query 4400 ATCTACCTTTATGCCCA--GAACATTTTGTACCACCTGGTA-GCAAGCAACAAAAACTCA 4456
||||||| || ||||| | || | | || ||||| | || || || | |||||
Sbjct 311 ATCTACCGTTCTGCCCGACGCGCAATAAG--CCGCCTGGCAAGCGAG-AATATAAACTTT 255
Query 4457 CGACAACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTT 4516
| || || |||||||||| || || ||||| ||| |||||| | |||||
Sbjct 254 TAGCGACCTTGCACGATAAAAAGCGGTACGTCATTCATTATTGCAATTTGCAGCAATGCA 195
Query 4517 TAGATTTAGGTTTAGTTCTTAAGAAA-ATACACCTAGTCTTGAAATTTGAGCAATCAGAC 4575
| ||| | | ||| | ||||||| || || |||||| ||||| |
Sbjct 194 CTCGTCACGGTCTCCG-CGTAATACGGATACACCGTGTATTACAATTTGTTCAATCCGCT 136
Query 4576 TGGCTCA--AATCATATATCGATAAAAATACCGCATGCCGAAAACTAGCTAAGAATGAGT 4633
|||||| ||| ||| | | |||| | || | | || | | || || || || |
Sbjct 135 TGGCTCCGCAATTATACAGAGTTAAACACACAGTTT--CGTACCTTCGCGAAAAACGATT 78
Query 4634 TCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATG 4693
|||| ||||| || |||||||||||||||||||| || || ||||| || ||||| |||
Sbjct 77 TCGAGAAAAATTTATATAAATTAATGAATAATGCCGTATTCGGAAAAACTATGGAAAATT 18
Query 4694 TACGAAA 4700
|||| ||
Sbjct 17 TACGCAA 11
>seq11077
Length=71718
Score = 89.7 bits (98), Expect = 1e-13
Identities = 109/149 (73%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 17345 ATAACTGGTTTCATGAGTTTCGTAAATACATATGGGCTCTCACAGAGCCCAAAAAGTAAG 17404
||||||| ||| || | ||| ||||| ||||| || || || | ||||| ||||
Sbjct 68988 ATAACTGATTTTATTATTTTTGTAAAAACATAGGGACTGGTGCATAAGCCAAACGGTAAA 68929
Query 17405 CACGTAAATTCATATAACTGGGCCTGGAATCTAAATTTGAAATATTTTCTATTACTTTTG 17464
|| ||||||| |||||| | || ||||||| | |||| ||||||||||| |||
Sbjct 68928 CATGTAAATTGATATAATTTATCCGAAAATCTAACTCTGAAGAATTTTCTATTATTTTCT 68869
Query 17465 TGTATCGGTATCGCGAAATATGCGTCTTT 17493
||||||| ||| | |||||||||| ||
Sbjct 68868 CGTATCGGGATCAAGTAATATGCGTCCTT 68840
>seq5973
Length=4785
Score = 89.7 bits (98), Expect = 1e-13
Identities = 194/287 (68%), Gaps = 9/287 (3%)
Strand=Plus/Minus
Query 7196 CACTGTCTTTATCTATTACCACAAATCCATATTTA---TTCCAACATGC-CGAGCATAAA 7251
||||||| || ||||| || | ||||||||| | | | |||| | | ||| |||||
Sbjct 1977 CACTGTCCTTGTCTATCACTAAAAATCCATAATCACGCTGCCAAAAATCGCGA-CATAAT 1919
Query 7252 TCTCTGAATGAGTTGTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGA 7311
|| | || | |||| |||||| || || || |||| || | || ||||
Sbjct 1918 TCGTTAAAATCATCATATGACATGTCGGTGTTTACGTGATG----TACACGTGTTTCAAG 1863
Query 7312 TTCATTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTG 7371
|| | |||||||| |||||| | || ||||| || || || | || || | |||
Sbjct 1862 TTGGTATCATCTTGTTTGAACAGGATCAGCAAGTTCGCTTTGTCGCGTATAAGATATTTG 1803
Query 7372 GGTATTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATG 7431
||||||| || || | ||| ||||||| |||| ||| | || | ||||||||||||
Sbjct 1802 GGTATTCTTGCGTATGACTGATAGAGATAAAAGCAGTCGATATTCGAGTGTCGACCCATT 1743
Query 7432 CAGAAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACATCGTC 7478
| ||| | || | | | |||||| || || || ||||| || ||
Sbjct 1742 GAAAAATATTCTCTCACGACATCCTGCTTATCGCACGCAACGTCATC 1696
>seq841
Length=6255
Score = 89.7 bits (98), Expect = 1e-13
Identities = 157/224 (70%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436
|||||||| || | || ||||| || | | | | |||||| |||| ||||| | |
Sbjct 1210 GATCATTGCCATCTGACCGGTAAATATCGTGGTCCCGCACATTCAAAT--TGTAATCTAA 1153
Query 3437 ATTATCAAAAATC-TACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCC 3495
|||| |||| || || | || ||| | || ||||| |||||||| | ||| |||||
Sbjct 1152 CTTATAAAAATTCATATTAC-ATTCCAATAGTTTTTCACAATTTATCAGACTACGATTCA 1094
Query 3496 CACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATC 3555
|| || ||||| || |||| || || |||||||||| | || ||||| ||
Sbjct 1093 CATTTTATAATAAAAAAAATAGCAACCGTGTTTGAAGGTGGCGTCAGTTTGCTACCAATA 1034
Query 3556 AATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
| |||||| ||||||||||| || ||| | ||| |||||||
Sbjct 1033 ACAAAAGAAAAATACATTTCTTTTACCAAAATTGTTGAAAATAC 990
>seq736
Length=9941
Score = 89.7 bits (98), Expect = 1e-13
Identities = 157/224 (70%), Gaps = 6/224 (3%)
Strand=Plus/Plus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACAT--AAATCCTGTAACGTTA 3436
|||||||||||| | || |||| || ||| | | || ||| |||| |||||| | |
Sbjct 3714 GATCATTGTCACATAACCGGTAGATATCGAGGTCCCGCGCATTCAAAT--TGTAACCTAA 3771
Query 3437 ATTATCAAAAATC-TACCATTATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCC 3495
|||| |||| || || | || ||||| || ||||| |||||||| ||||| ||||
Sbjct 3772 GTTATAAAAATTCGTATTA-CATTCCAGTAGTTTTTCACAATTTATCAGGCTACAATTCA 3830
Query 3496 CACTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATC 3555
|| || ||||| || |||| || || || ||||||| || | |||| ||
Sbjct 3831 CATTTTATAATAAAAGAAATAGCAACCGTGTTCGAAGGTGGCATCAATCTGCTACTAATA 3890
Query 3556 AATAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
| |||||| ||||||||||| || ||| | ||| || ||||
Sbjct 3891 ACAAAAGAAAAGTACATTTCTTTTACCAAAATTGTTGAAGATAC 3934
>seq1
Length=3068
Score = 89.7 bits (98), Expect = 1e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 4618 CTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGA 4677
|| || || ||||| |||||||||||||| ||||| || |||||||||||||| |||||
Sbjct 1413 CTCGCCAAAAATGATTTCGAAAAAAACTTGTATAAGTTGATGAATAATGCGGTGTTTGGT 1354
Query 4678 AAGACGATGGAGAATGT 4694
|| || |||||||||||
Sbjct 1353 AAAACAATGGAGAATGT 1337
>seq10840
Length=94547
Score = 87.8 bits (96), Expect = 4e-13
Identities = 154/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAAT 3438
|||||||| ||| | ||||||| || ||| | | || ||| | || || | |||
Sbjct 14118 GATCATTGCCACATAACGGGTAGATATCGAGGTCCCGCGCATTCAATTTGCAATTTAAAT 14177
Query 3439 TATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCCA 3497
||| || ||| || | || || | || ||||| |||||||||||||||||| | ||
Sbjct 14178 TATAAACAAT-TATTTTACATTCCGATAGTATTTCACAATTTATCCGGCTATGATGCGCA 14236
Query 3498 CTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCAA 3557
|| || |||||| | || |||| || |||| |||| ||||| || || |
Sbjct 14237 TTTTATTATTAAGGAGATGGCAACAGCGTTCAAAGGGAAAATCGACTTACTTCCAATTAC 14296
Query 3558 TAAAGAACGTTACATTTCTTTCACAAAATTAGTTAAAAATAC 3599
||||||| |||||||| || || |||| ||| |||||||
Sbjct 14297 TAAAGAAAAATACATTTCGTTTACTAAATATGTTCAAAATAC 14338
>seq4247
Length=6568
Score = 86.0 bits (94), Expect = 1e-12
Identities = 95/124 (77%), Gaps = 2/124 (2%)
Strand=Plus/Minus
Query 7957 GCTCCCACTTGAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGC 8016
||| || ||||||| || ||||| || ||||| | |||||||||||||| || ||
Sbjct 6329 GCTTCCTTTTGAACTGCATATACCTGGATATCAATTTTGCGGTCCGGGTACTAAACTAAA 6270
Query 8017 CAAGAGATTAGCTCGAGGTGATTCAGG-TATAAATCCTTTGGACGCTGCGTGTAAGGAAC 8075
||| |||| || |||| || ||||| ||| ||||| |||||||| |||||| ||||
Sbjct 6269 AAAGCGATTGGCCAGAGGCGA-TCAGGATATTAATCCGTTGGACGCGGCGTGTCGCGAAC 6211
Query 8076 ACGA 8079
||||
Sbjct 6210 ACGA 6207
>seq11256
Length=6468
Score = 84.2 bits (92), Expect = 4e-12
Identities = 145/208 (70%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 3379 GATCATTGTCACTTTACGGGTAACTACAGAGATGCTGCACATAAATCCTGTAACGTTAAT 3438
|||||||| || || || ||| ||| | | | ||||| || |||||| | |||
Sbjct 3227 GATCATTGCCATTTGACTGGTCGTTACCGCGGTCCTGCATATTCTATCTGTAATTTAAAT 3168
Query 3439 TATCAAAAATCTACCATT-ATCCCAGTTGTCTTTCATAATTTATCCGGCTATGATTCCCA 3497
|||| ||| | || ||| || |||||| | ||| |||||||||| || || ||||| ||
Sbjct 3167 TATCGAAA-TGTATCATACATGCCAGTTATTTTTTATAATTTATCTGGATACGATTCGCA 3109
Query 3498 CTTCATAATTAAGTCCTTAGCTACAGTATTTGAAGGTGAAATTTCATTACTACCGATCAA 3557
||||| |||||| ||||||||| || || | | | |||| || | ||
Sbjct 3108 TTTCATTATTAAGGAAATAGCTACAGCGTTCAAAAAGAAGACTGACGTACTCCCCACCAC 3049
Query 3558 TAAAGAACGTTACATTTCTTTCACAAAA 3585
|||||| ||||||||||| ||||||
Sbjct 3048 GAAAGAAAAGTACATTTCTTTTACAAAA 3021
>seq1075
Length=13836
Score = 84.2 bits (92), Expect = 4e-12
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 7266 GTATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTG 7325
||| | |||||| ||||| | ||||| | || |||||| ||||| || ||| ||
Sbjct 10475 GTAAGACATGTCGGTATTTATGTGATCGTTGTACGCATGCTTTAGATTGATAATATCCTG 10534
Query 7326 ACGGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATA 7385
||| | | || || || || || || | || || || || ||||| || |||
Sbjct 10535 CTTGAATAAAATTAGCAAATTCGCGTTGTCGCGTATAAGATGTTTCGGTATCTTTGCATA 10594
Query 7386 AGTTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAG-CTT 7444
|| |||||||||||||||| |||||||||| ||||| | |||| | |||| || ||
Sbjct 10595 CGTCTGACAGAGATAGAAGCAGTCAACATCCATGTGTTGTTCCAT-TATAAAATAGTCTC 10653
Query 7445 TGATGTGATCCTGTTTTTCACAAGCAACATCGTCAAATAT 7484
| || ||| | || ||||| || || || ||||| ||
Sbjct 10654 TTATCGTATCTTACTTGTCACATGCCACGTCATCAAAGAT 10693
>seq1624
Length=11204
Score = 82.4 bits (90), Expect = 1e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 7967 GAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTA 8026
||||| || || || ||||| |||| |||||||||||||| | ||| ||||
Sbjct 10870 GAACTACATATTCCCGGTTACCAGTTTTGCGGTCCGGGTACTCGACTGAAAAAGCGATTG 10811
Query 8027 GCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCT 8086
||| ||||||| |||||||||||| | ||||| |||||| |||||||| || ||
Sbjct 10810 GCTAGAGGTGACCGAGGTATAAATCCGCTCGACGCGGCGTGTCGCGAACACGACATTGCG 10751
Query 8087 TACTC 8091
|||||
Sbjct 10750 TACTC 10746
>seq992
Length=6016
Score = 82.4 bits (90), Expect = 1e-11
Identities = 203/305 (67%), Gaps = 5/305 (2%)
Strand=Plus/Plus
Query 7177 TACCTACCACTCTTCAATTCACTGTCTTTATCTATTACCACAAATCCATATTTA---TTC 7233
|| ||||| | |||| ||||||| ||||| |||||||| || || || || | |
Sbjct 4517 TATCTACCGTTTCTCAACGCACTGTCCTTATCGATTACCACGAAACCGTACTTTCGCTGC 4576
Query 7234 CAACATGCCGAGCATAAATCTCTGAATGAGTTGTATGGCATGTCCGTATTGACATGATCA 7293
||||| | || || || | | || | ||| | |||||| || || || | |||
Sbjct 4577 CAACACTC-GA-CACAATGCGCAAAAATCCTCGTACGACATGTCGGTGTTCACGTCATCG 4634
Query 7294 TCATAAATATGCTTCAGATTCATTTCATCTTGACGGAACAGCACGAGAAAGTTTGCATTA 7353
| | | |||| |||| || | || || || || |||| || | | |||||| ||
Sbjct 4635 TTGTGCACATGCCTCAGGTTGGTGTCGTCCTGTCGAAACAAAACCAAGAGGTTTGCGTTG 4694
Query 7354 TCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGATAGAAGCTGTCAACA 7413
|| | |||||||| || ||||| | || || ||||||||||| || | || ||
Sbjct 4695 TCCCGTATCAGGTGTTTCGGTATCTTGGCGTACGTCTGACAGAGATAAAAACAATCGACG 4754
Query 7414 TCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGTTTTTCACAAGCAACA 7473
| | |||||||||||| | ||| | || |||| || ||| || || ||||| ||
Sbjct 4755 TTCGAATGTCGACCCATGGAAAAATACTCTCTGATTGTATTCTGGTTGTCGCAAGCTACG 4814
Query 7474 TCGTC 7478
|| ||
Sbjct 4815 TCATC 4819
>seq10711
Length=17636
Score = 80.6 bits (88), Expect = 5e-11
Identities = 126/176 (72%), Gaps = 6/176 (3%)
Strand=Plus/Minus
Query 3413 CTGCACATAAATCCTGTAACGTTAATTATCAAAAATCTACCATT-ATCCCAGTTGTCTTT 3471
|||||||| | ||| || | ||||||||||| | || ||| || |||||| | |||
Sbjct 12004 CTGCACATTATCTCTGCAATCTAAATTATCAAAA-TGTATCATACATGCCAGTTATTTTT 11946
Query 3472 CATAATTTATCCGGCTATGATTCCCACTTCATAATTAAGTCCTTAGCTACAGTATTTGAA 3531
|| |||||||| || || ||||| || ||||| ||||| |||| || || ||
Sbjct 11945 CACAATTTATCTGGATACGATTCGCATTTCATTATTAAAGAAATAGCCACGACGTTCAAA 11886
Query 3532 GGTGAAATTTCAT--TACTACCGATCAATAAAGAACGTTACATTTCTTTCACAAAA 3585
|| ||| | || |||| || |||| |||||| ||||||||||| ||||||
Sbjct 11885 GG--AAAGTCCAACGTACTCCCCATCACAAAAGAAAAGTACATTTCTTTTACAAAA 11832
>seq1850
Length=13327
Score = 80.6 bits (88), Expect = 5e-11
Identities = 96/124 (77%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 7972 TCACATA--CCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTAGCT 8029
||||||| ||||| ||||||| ||||||||||| || | | | || |||| ||
Sbjct 11606 TCACATATCCCAGGATATCAGTTTTGCGGTCCGGGAACGCACCTGGGAAAACAATTA-CT 11664
Query 8030 C-GAGGTGATTCAG-GTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCTT 8087
| |||| ||| ||| |||||||||| || |||| |||||| | || |||||||||||||
Sbjct 11665 CAGAGGCGAT-CAGAGTATAAATCCGTTACACGCAGCGTGTCACGAGCACGATATAGCTT 11723
Query 8088 ACTC 8091
||||
Sbjct 11724 ACTC 11727
>seq1007
Length=9575
Score = 80.6 bits (88), Expect = 5e-11
Identities = 97/131 (74%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 7967 GAACTTCACATACCAGGTTATCAGTACTGCGGTCCGGGTACAAAGTTAGCCAAGAGATTA 8026
|| || || || || || |||||| ||| ||||||| ||| | || | ||| |||||
Sbjct 8368 GAGCTACATATCCCTGGAAATCAGTTTTGCAGTCCGGGAACACACTTGGAAAAGCGATTA 8427
Query 8027 GCTCGAGGTGATTCAGGTATAAATCCTTTGGACGCTGCGTGTAAGGAACACGATATAGCT 8086
||| |||| ||| |||||||||||| || |||| ||||| |||||||| || | |
Sbjct 8428 GCTAGAGGCGATCAAGGTATAAATCCACTGAACGCAGCGTGCCGCGAACACGACATTGTT 8487
Query 8087 TA--CTCAAAA 8095
|| |||||||
Sbjct 8488 TATTCTCAAAA 8498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97960280419344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |