Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_007497.1
Length=44856
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 192 2e-44
>seq7345
Length=15758
Score = 192 bits (212), Expect = 2e-44
Identities = 520/781 (67%), Gaps = 16/781 (2%)
Strand=Plus/Minus
Query 27636 GTTGCAGGCGAATCGCGGCTCGACGCCGCCTTTTCCGTCCGACACCATCACATCGCAGTA 27695
|||||||| | ||||||||| ||| || || || |||| ||||| | ||||||||
Sbjct 8255 GTTGCAGGTGTGTCGCGGCTCCTGGCCACCCTTCCCATCCGGCACCAACTGGTCGCAGTA 8196
Query 27696 GCGCGCGATTTCGTACAGCCCCCACTTGTCGATCATCGATGCATCGACGGTCTTTCCGAG 27755
| | || ||||| | |||| ||| | |||| | || | || | || || |
Sbjct 8195 CTGGGAAATCCGGTACATCTCCCAACGGTCTACCATCCAGGCCTTGATGCGTTTACCCAC 8136
Query 27756 CCCGTAGCGCTCGTTCAACAGCAGGTCGTAGAAGATCCACGCGGGATTGTTCGTCCATGC 27815
||| |||| ||||| || | ||||||| | ||| | || |||| ||||| ||
Sbjct 8135 ACCGAAGCGATCGTTGGTCACGATGTCGTAGGTGTGCCAGACCGGGTTGTCGGTCCAGGC 8076
Query 27816 CGGTTTGAACGTGCCGTCCCACGTGCCCGAGTACGTGCGCGTCTCAGGATCGTAGTTCGA 27875
| |||| | |||||||||||| |||| ||| | || ||||| |||||||| ||
Sbjct 8075 CTGTTTCATCGTGCCGTCCCAGATGCCGAGGTAGGCCCGGGTCTCCGGATCGTAATTGCT 8016
Query 27876 CGGCACACGCACGATCAGACCTCGAACGTGGTACGAGCGCACCGGGACCTGCGAGAACGA 27935
|||||| | || || | || || || | | | |||| | | ||||
Sbjct 8015 CGGCACTTGGACCTTCCGCCCGCGGCAGTCGACTGTGACAGCCGGAATGTTGCTGAACT- 7957
Query 27936 GCGC-GCGTCGAAC--GTCATACCCACGAGCGCAGTCATCGGATAGCGCAGCTTGCGGTC 27992
|| | ||| |||| | | ||| | || || || |||| ||||||||||| |||
Sbjct 7956 GCTCTGCGCTGAACTCGACGTAC--AGCAGGGCCGTGTTCGGGTAGCGCAGCTTCGCGTC 7899
Query 27993 GATGATTTCGGTGATCGCCT-CGATGTTCACCGTGTCGGCGATCAGCGAGCTGTGCGCAT 28051
||| | |||||| | ||| |||| || ||||||||||| | | ||| | |
Sbjct 7898 GATCACCTCGGTG-TAGCCGGCGATCAGCATGGTGTCGGCGATGCGGTTGTTGTTCTGGT 7840
Query 28052 TCGGCGTAATGCGCCGCACGCGCACCAGCCAGCCGGATT--TCGCACTCGGCAGCTCGAT 28109
||||||| | ||| || ||||||||| ||||||| ||| | || |||||| |||||
Sbjct 7839 TCGGCGTCAGGCGGCGGACGCGCACCTGCCAGCC--ATTGGTGGCCGCCGGCAGGTCGAT 7782
Query 28110 CCGATGGGAACGCTCGTACAGCGACGTCGTCTTGCCGTCAAAGGCGCCGCGCAGCACTTC 28169
||| ||||||||||||| | | || |||||||| || | ||| |||||||||| ||
Sbjct 7781 CCGGCGGGAACGCTCGTAGCGGGTGGTGGTCTTGCCATCGACGGCCTCGCGCAGCACCTC 7722
Query 28170 CGCGTACGAGCCCCCGTCAACCGACAGGTCAATCGCATACTCGACTCGGTAGCCGAACAC 28229
| || | ||| ||||| | ||| || | ||||| |||| ||||| ||| |
Sbjct 7721 CTGATAGGCGCCGCCGTCGGTGGCCAGATCTACGGCATATTCGATCCGGTACCCGCCGAT 7662
Query 28230 GCCGGACGACGG-GTCACTCTTCTGCAGCGCAGGCACGCCGAAGCGAATACGGACTGCCG 28288
| | || || ||| || ||| ||||| ||| | ||||||| | ||| ||||| |
Sbjct 7661 G-TTGCCGTTGGTGTCCTGCTGCTGGAGCGCTGGCCAGGCGAAGCGCAGACGCACTGCGG 7603
Query 28289 TGAGCTGCGTGTTCTGCACCTGCCGCACCCAAGGCGCATC-CGACGTCAGCGGGATCCCA 28347
||||| | || || | |||||||| |||| ||| | || || | ||
Sbjct 7602 AAAGCTGGATATTGCTCAGCGAGCGCACCCAGGGCGTATCGCTGCG-CAACTCGACGTTG 7544
Query 28348 ACCGCAGTTTCGCGCTCGACCGCCGGAAAGCCAGGCATGTAGTCCTGATCCAGCGTTCCC 28407
|| | || ||| ||| ||||| |||| |||||| || |||||||| |||| || |||
Sbjct 7543 ACAGACGTCTCGTTCTCAACCGCAGGAATGCCAGGGATATAGTCCTGGTCCACCGACCCC 7484
Query 28408 G 28408
|
Sbjct 7483 G 7483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143396931372576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |