Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq7345 192 2e-44 >seq7345 Length=15758 Score = 192 bits (212), Expect = 2e-44 Identities = 520/781 (67%), Gaps = 16/781 (2%) Strand=Plus/Minus Query 27636 GTTGCAGGCGAATCGCGGCTCGACGCCGCCTTTTCCGTCCGACACCATCACATCGCAGTA 27695 |||||||| | ||||||||| ||| || || || |||| ||||| | |||||||| Sbjct 8255 GTTGCAGGTGTGTCGCGGCTCCTGGCCACCCTTCCCATCCGGCACCAACTGGTCGCAGTA 8196 Query 27696 GCGCGCGATTTCGTACAGCCCCCACTTGTCGATCATCGATGCATCGACGGTCTTTCCGAG 27755 | | || ||||| | |||| ||| | |||| | || | || | || || | Sbjct 8195 CTGGGAAATCCGGTACATCTCCCAACGGTCTACCATCCAGGCCTTGATGCGTTTACCCAC 8136 Query 27756 CCCGTAGCGCTCGTTCAACAGCAGGTCGTAGAAGATCCACGCGGGATTGTTCGTCCATGC 27815 ||| |||| ||||| || | ||||||| | ||| | || |||| ||||| || Sbjct 8135 ACCGAAGCGATCGTTGGTCACGATGTCGTAGGTGTGCCAGACCGGGTTGTCGGTCCAGGC 8076 Query 27816 CGGTTTGAACGTGCCGTCCCACGTGCCCGAGTACGTGCGCGTCTCAGGATCGTAGTTCGA 27875 | |||| | |||||||||||| |||| ||| | || ||||| |||||||| || Sbjct 8075 CTGTTTCATCGTGCCGTCCCAGATGCCGAGGTAGGCCCGGGTCTCCGGATCGTAATTGCT 8016 Query 27876 CGGCACACGCACGATCAGACCTCGAACGTGGTACGAGCGCACCGGGACCTGCGAGAACGA 27935 |||||| | || || | || || || | | | |||| | | |||| Sbjct 8015 CGGCACTTGGACCTTCCGCCCGCGGCAGTCGACTGTGACAGCCGGAATGTTGCTGAACT- 7957 Query 27936 GCGC-GCGTCGAAC--GTCATACCCACGAGCGCAGTCATCGGATAGCGCAGCTTGCGGTC 27992 || | ||| |||| | | ||| | || || || |||| ||||||||||| ||| Sbjct 7956 GCTCTGCGCTGAACTCGACGTAC--AGCAGGGCCGTGTTCGGGTAGCGCAGCTTCGCGTC 7899 Query 27993 GATGATTTCGGTGATCGCCT-CGATGTTCACCGTGTCGGCGATCAGCGAGCTGTGCGCAT 28051 ||| | |||||| | ||| |||| || ||||||||||| | | ||| | | Sbjct 7898 GATCACCTCGGTG-TAGCCGGCGATCAGCATGGTGTCGGCGATGCGGTTGTTGTTCTGGT 7840 Query 28052 TCGGCGTAATGCGCCGCACGCGCACCAGCCAGCCGGATT--TCGCACTCGGCAGCTCGAT 28109 ||||||| | ||| || ||||||||| ||||||| ||| | || |||||| ||||| Sbjct 7839 TCGGCGTCAGGCGGCGGACGCGCACCTGCCAGCC--ATTGGTGGCCGCCGGCAGGTCGAT 7782 Query 28110 CCGATGGGAACGCTCGTACAGCGACGTCGTCTTGCCGTCAAAGGCGCCGCGCAGCACTTC 28169 ||| ||||||||||||| | | || |||||||| || | ||| |||||||||| || Sbjct 7781 CCGGCGGGAACGCTCGTAGCGGGTGGTGGTCTTGCCATCGACGGCCTCGCGCAGCACCTC 7722 Query 28170 CGCGTACGAGCCCCCGTCAACCGACAGGTCAATCGCATACTCGACTCGGTAGCCGAACAC 28229 | || | ||| ||||| | ||| || | ||||| |||| ||||| ||| | Sbjct 7721 CTGATAGGCGCCGCCGTCGGTGGCCAGATCTACGGCATATTCGATCCGGTACCCGCCGAT 7662 Query 28230 GCCGGACGACGG-GTCACTCTTCTGCAGCGCAGGCACGCCGAAGCGAATACGGACTGCCG 28288 | | || || ||| || ||| ||||| ||| | ||||||| | ||| ||||| | Sbjct 7661 G-TTGCCGTTGGTGTCCTGCTGCTGGAGCGCTGGCCAGGCGAAGCGCAGACGCACTGCGG 7603 Query 28289 TGAGCTGCGTGTTCTGCACCTGCCGCACCCAAGGCGCATC-CGACGTCAGCGGGATCCCA 28347 ||||| | || || | |||||||| |||| ||| | || || | || Sbjct 7602 AAAGCTGGATATTGCTCAGCGAGCGCACCCAGGGCGTATCGCTGCG-CAACTCGACGTTG 7544 Query 28348 ACCGCAGTTTCGCGCTCGACCGCCGGAAAGCCAGGCATGTAGTCCTGATCCAGCGTTCCC 28407 || | || ||| ||| ||||| |||| |||||| || |||||||| |||| || ||| Sbjct 7543 ACAGACGTCTCGTTCTCAACCGCAGGAATGCCAGGGATATAGTCCTGGTCCACCGACCCC 7484 Query 28408 G 28408 | Sbjct 7483 G 7483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143396931372576