Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq9711 86.0 5e-12 seq7200 82.4 6e-11 >seq9711 Length=151070 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||| | || || ||||| || ||||| || |||||||||| || ||| ||||| Sbjct 104459 AGTACAAGGTGGAGTGTGGATTCTTTTTGAATATTGTAGTCGGACAAAGTTCGTCCGTCC 104400 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||||||| || |||| || | || || || ||| | |||||||||||| Sbjct 104399 TCGAGTTGTTTGCCAGCGAAAATCAGTCTTTGCTGATCGGGAGGAATGCCCTCTTTGTCT 104340 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||||| | |||||| | | | ||||| | ||| || | || || ||| Sbjct 104339 TGAATTTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCCTCGACCTCTAGTGTTATAGTT 104280 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || | || |||||||| |||||||| Sbjct 104279 TTGCCAGTTAAAGTCTTGACAAATATCTGCAT 104248 >seq7200 Length=105881 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||||| ||| || || ||||| |||||||| || | | || ||||| Sbjct 105352 AGAACTAAATGCAACGTTGATTCTTTTTGAATGTTGTAATCAGAAAGTGTGCGACCGTCC 105293 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||||||||| ||| | || | | || || ||| ||| | || || || || Sbjct 105292 TCAAGTTGTTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCT 105233 Query 16844 GCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||||| ||||| || | | | ||||| | ||| ||||| |||||||| Sbjct 105232 TGAATTTT-TGCTTTGACGTTTTCGATCGTGTCCGAAGCCTCGACTTCCAATGTGATGGT 105174 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||||| || || ||||||||||||||||||||| Sbjct 105173 TTTTCCTGTGAGAGTTTTGACAAAAATCTGCATT 105140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405028084446640