Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq9711 86.0 5e-12
seq7200 82.4 6e-11
>seq9711
Length=151070
Score = 86.0 bits (94), Expect = 5e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||| | || || ||||| || ||||| || |||||||||| || ||| |||||
Sbjct 104459 AGTACAAGGTGGAGTGTGGATTCTTTTTGAATATTGTAGTCGGACAAAGTTCGTCCGTCC 104400
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||||||||| || |||| || | || || || ||| | ||||||||||||
Sbjct 104399 TCGAGTTGTTTGCCAGCGAAAATCAGTCTTTGCTGATCGGGAGGAATGCCCTCTTTGTCT 104340
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||||| | |||||| | | | ||||| | ||| || | || || |||
Sbjct 104339 TGAATTTTCGCCTTCACGTTCTCGATTGTGTCCGAAGCCTCGACCTCTAGTGTTATAGTT 104280
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| || || | || |||||||| ||||||||
Sbjct 104279 TTGCCAGTTAAAGTCTTGACAAATATCTGCAT 104248
>seq7200
Length=105881
Score = 82.4 bits (90), Expect = 6e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||||| ||| || || ||||| |||||||| || | | || |||||
Sbjct 105352 AGAACTAAATGCAACGTTGATTCTTTTTGAATGTTGTAATCAGAAAGTGTGCGACCGTCC 105293
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||||||||| ||| | || | | || || ||| ||| | || || || ||
Sbjct 105292 TCAAGTTGTTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATTCCTTCCTTATCT 105233
Query 16844 GCAATTTGCTGCTTC-ACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
||||| ||||| || | | | ||||| | ||| ||||| ||||||||
Sbjct 105232 TGAATTTT-TGCTTTGACGTTTTCGATCGTGTCCGAAGCCTCGACTTCCAATGTGATGGT 105174
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|||||| || || |||||||||||||||||||||
Sbjct 105173 TTTTCCTGTGAGAGTTTTGACAAAAATCTGCATT 105140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405028084446640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |