Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_008203.1 Length=52047 Score E Sequences producing significant alignments: (Bits) Value seq3805 84.2 7e-12 >seq3805 Length=3888 Score = 84.2 bits (92), Expect = 7e-12 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 4246 CAGTAGCTCAATCGGTAGAGCAGCGGTCTCCAAAGCCGCGCGTTGGAGGTTCGAGTCCTC 4305 |||||||||||| || |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 2181 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 2240 Query 4306 CCTGGC 4311 |||||| Sbjct 2241 CCTGGC 2246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166404815113488