Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_009542.2
Length=33985
Score E
Sequences producing significant alignments: (Bits) Value
seq5678 118 2e-22
>seq5678
Length=1680
Score = 118 bits (130), Expect = 2e-22
Identities = 140/187 (75%), Gaps = 6/187 (3%)
Strand=Plus/Minus
Query 22988 CTGCCGGACTTTGGCCCCGTCTCACAGGACACCTGGGCTATCCAGCTTATCCGCGAGCGC 23047
||||||||||| || || | || ||||| | |||||| || ||||| ||||| |||||
Sbjct 959 CTGCCGGACTTCGGGCCGCTGTCGCAGGATATCTGGGCCATTCAGCTGATCCGGGAGCGT 900
Query 23048 AAGGCGCTGGACGACGTGATCAA---GGGGCGCATCCCCCAGGCGATCAGCAAGTGCGCC 23104
||||| | || ||||| | ||| |||||| | |||| ||| |||| | |
Sbjct 899 CGAGCGCT-GCCG--CTGATCCAGTCGGGTCGCATCGCGGAGGCCATCGCCAAGGTCCGC 843
Query 23105 AACATGTGGGCCAGCCTGCCCGGCGCCGGCTACGGCCAGCGCGAGCACAAGCTGGCGGAT 23164
||||| ||||| |||||||| || |||||||| ||||||| |||| | |||||||| |
Sbjct 842 AACATCTGGGCGAGCCTGCCGGGGGCCGGCTATGGCCAGCCCGAGAAGAAGCTGGCCAAC 783
Query 23165 CTGCTGG 23171
|||||||
Sbjct 782 CTGCTGG 776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 108614744729904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |