Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq5678 118 2e-22 >seq5678 Length=1680 Score = 118 bits (130), Expect = 2e-22 Identities = 140/187 (75%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 22988 CTGCCGGACTTTGGCCCCGTCTCACAGGACACCTGGGCTATCCAGCTTATCCGCGAGCGC 23047 ||||||||||| || || | || ||||| | |||||| || ||||| ||||| ||||| Sbjct 959 CTGCCGGACTTCGGGCCGCTGTCGCAGGATATCTGGGCCATTCAGCTGATCCGGGAGCGT 900 Query 23048 AAGGCGCTGGACGACGTGATCAA---GGGGCGCATCCCCCAGGCGATCAGCAAGTGCGCC 23104 ||||| | || ||||| | ||| |||||| | |||| ||| |||| | | Sbjct 899 CGAGCGCT-GCCG--CTGATCCAGTCGGGTCGCATCGCGGAGGCCATCGCCAAGGTCCGC 843 Query 23105 AACATGTGGGCCAGCCTGCCCGGCGCCGGCTACGGCCAGCGCGAGCACAAGCTGGCGGAT 23164 ||||| ||||| |||||||| || |||||||| ||||||| |||| | |||||||| | Sbjct 842 AACATCTGGGCGAGCCTGCCGGGGGCCGGCTATGGCCAGCCCGAGAAGAAGCTGGCCAAC 783 Query 23165 CTGCTGG 23171 ||||||| Sbjct 782 CTGCTGG 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108614744729904