Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_013055.1
Length=39896
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 100 7e-17
>seq7345
Length=15758
Score = 100 bits (110), Expect = 7e-17
Identities = 240/362 (66%), Gaps = 6/362 (2%)
Strand=Plus/Plus
Query 29313 CGATGCGCCGTGGGTGCGGCAGGTGCAAAACACGCAGCTGTCGGCGGTCCGTATTCGCTT 29372
|||| |||| |||||||| | || || | ||||| || || || ||| | |||||
Sbjct 7562 CGATACGCCCTGGGTGCGCTCGCTGAGCAATATCCAGCTTTCCGCAGTGCGTCTGCGCTT 7621
Query 29373 CGGCCTGCCGGCGCTGCAAAAGAGCGATCCGGCGACCGGCGTGTTCGGC---TATCGCGT 29429
|| | ||| ||||| || || || | | |||| ||||| || || |
Sbjct 7622 CGCCTGGCCAGCGCTCCAGCAGCAGGACACC---AACGGCAACATCGGCGGGTACCGGAT 7678
Query 29430 GGAATATGCGATCGATCTGTCGGTCGACGGAGGCTCGTACGCACAGGTGCTGTCGTCGGC 29489
|||||||| | |||||| | |||||| ||| | || |||||||| |||
Sbjct 7679 CGAATATGCCGTAGATCTGGCCACCGACGGCGGCGCCTATCAGGAGGTGCTGCGCGAGGC 7738
Query 29490 CTTCGATGGCAAGACGACGTCGCTTTACGAGCGCTCGCACCGGATCGAGTTGCCGCGCGC 29549
| ||||||||||||| || | | |||||||| || | ||||||||| ||||| ||
Sbjct 7739 CGTCGATGGCAAGACCACCACCCGCTACGAGCGTTCCCGCCGGATCGACCTGCCGGCGGC 7798
Query 29550 CACAACCGGCTGGTTGGCCCGCGTGCGCCGCATCACGCCTAACGCACACAGCTCACTGAT 29609
||| | |||||| || ||||| |||||| | ||||| ||| ||| | | ||
Sbjct 7799 CACCAATGGCTGGCAGGTGCGCGTCCGCCGCCTGACGCCGAACCAGAACAACAACCGCAT 7858
Query 29610 TGCGGACACGGTGAATATCGAAGCGATCACGGAGGTGATTGACCGCAAGCTGCGGTATCC 29669
|| ||||| || |||| | ||| |||||||| ||| |||||||| || ||
Sbjct 7859 CGCCGACACCATGCTGATCGCCGGCTACACCGAGGTGATCGACGCGAAGCTGCGCTACCC 7918
Query 29670 GA 29671
||
Sbjct 7919 GA 7920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127527218765856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |