Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq10234 89.7 6e-13 >seq10234 Length=192330 Score = 89.7 bits (98), Expect = 6e-13 Identities = 202/302 (67%), Gaps = 4/302 (1%) Strand=Plus/Plus Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 ||||||||||| || || || ||| |||||| |||||||| |||| || | Sbjct 2509 GGATAAAAATTAACGTCAATGACTTTATCTAGATTGCGGGTGACAATTTTTGCGACTGTT 2568 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436 | ||| || || |||||||| | || ||| ||| ||| || | | || || Sbjct 2569 TTAAGTTTATCAAAATCAAAAGTCTTGGTATCTGTATTAACAAACATGTTGACAGCAATA 2628 Query 116437 GACGCCAGATTACACACAG--AGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 || || | ||| ||||||| | |||| | | ||| || || | |||||| |||| Sbjct 2629 GATGCTAAATTGCACACAGCAACTTCTC--CAGGACCAGAATATTCAACAATTTCAGTAC 2686 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 ||| ||| || || || ||||| | | || ||||| || ||| ||||| || Sbjct 2687 ACAGATTGCTACATTTGATAGTGCCTATATGCTGGTGATTCGATTTTCGATTACATTGAT 2746 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 | || || |||||||| || || || ||||| |||||| ||||||| || |||||| Sbjct 2747 CTTTATAAAGCATATAAGGTGTTCCAGTCTCTACTTGGGATCTGAGAATGGCGATCCATA 2806 Query 116615 CA 116616 || Sbjct 2807 CA 2808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613414130957760