Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq8239 95.1 5e-15 >seq8239 Length=1603 Score = 95.1 bits (104), Expect = 5e-15 Identities = 124/170 (73%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 53315 CAGACGCTTGCGCAG--GCGCAGCAGATCGCCGATCTGCCTTTCGTTTATCCGCATGTGG 53372 ||| ||| || |||| ||||| || |||||| | || ||||| ||| |||| Sbjct 1429 CAGGCGCATGAGCAGCTGCGCAACA--TCGCCGCGATCCCGTTCGTCGGGCCGTGGGTGG 1486 Query 53373 CGCTGATGCCTGATGCGCATTTCGGTAAGGGCAGCAGTGTCGGCACGGTGATCCCGACCG 53432 | ||||||| || | ||| | || |||||| | || ||| |||||||||||||| Sbjct 1487 CCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTGGGCTCGGTGATCCCGACCC 1546 Query 53433 AGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCGATATTGGCTGCGGCATG 53482 || || | ||||||||||| ||||||||||| || |||||||||||| Sbjct 1547 GCGGTGCGATCATCCCGGCGGCGGTCGGCGTCGACATCGGCTGCGGCATG 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190564532833920