Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq6771 145 3e-29
seq9711 127 8e-24
seq7200 122 3e-22
seq11428 84.2 9e-11
>seq6771
Length=7421
Score = 145 bits (160), Expect = 3e-29
Identities = 163/218 (75%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || || ||||||||||| || ||||| |||||| | ||
Sbjct 323 ATGCAGATCTTCGTAAAAACTCTCACCGGTAAAACTATCACCCTTGAAGTTGAAGCTTCG 382
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | ||| ||||| || || || || |||||||| || ||||||
Sbjct 383 GATACTATAGAGAACGTGAAAGCTAAAATCCAGGACAAAGAGGGAATTCCCCCGGATCAA 442
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| |||||||| | || ||||| ||||||||||| || ||| | | ||||| ||
Sbjct 443 CAGCGTCTAATTTTCGCTGGCAAACAGCTTGAAGATGGCAGGACTCTTTCAGATTACAAC 502
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267
|| | ||||| ||||||| |||||||| || ||||
Sbjct 503 ATCCAAAAGGAATCAACACTCCACTTAGTTTTGCGACT 540
Score = 132 bits (146), Expect = 2e-25
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| ||||| || |||||||||||||| || || || |||||| | ||
Sbjct 95 ATGCAGATCTTCGTAAAAACTCTCACTGGTAAAACTATCACCCTCGAAGTTGAAGCTTCA 154
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | | ||| || || ||||| || ||||| |||||||| |||||
Sbjct 155 GACACTATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCAG 214
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| ||||||| | || ||||||||||||||||| |||||| | | || |||||
Sbjct 215 CAGCGTCTAATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTTTCCGACTATAAC 274
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
|| | ||||| | || |||||
Sbjct 275 ATCCAGAAGGAATCTACGCTTCA 297
>seq9711
Length=151070
Score = 127 bits (140), Expect = 8e-24
Identities = 123/158 (78%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| |||||||| || ||||| ||||| ||||| | || |||||| | ||
Sbjct 103792 ATGCAGATTTTTGTTAAAACTCTCACTGGCAAAACCATTACATTGGAGGTTGAAGCTTCG 103851
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | | ||| ||||||||||||||||||||||| ||||| |||||
Sbjct 103852 GACACAATTGAAAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATCCCTCCGGATCAG 103911
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207
|| | ||||| ||| | || |||||||| ||||||||
Sbjct 103912 CAGAGATTAATCTTCGCTGGAAAACAACTGGAAGATGG 103949
Score = 102 bits (112), Expect = 3e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || | ||||| |||||||| || || || || || | ||
Sbjct 104248 ATGCAGATATTTGTCAAGACTTTAACTGGCAAAACTATAACACTAGAGGTCGAGGCTTCG 104307
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | || ||||||||||| || || || |||||||| |||||
Sbjct 104308 GACACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCCGATCAG 104367
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||| | | |||||| | || |||||||| || || ||| |||||||| | || || |||
Sbjct 104368 CAAAGACTGATTTTCGCTGGCAAACAACTCGAGGACGGACGAACTTTGTCCGACTACAAT 104427
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273
||| | || || | ||||| ||| | ||| | |||| |||||
Sbjct 104428 ATTCAAAAAGAATCCACACTCCACCTTGTACTTCGACTTAGAGG 104471
>seq7200
Length=105881
Score = 122 bits (134), Expect = 3e-22
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||||||||||||| ||||||| || || ||||| | || ||||| ||||
Sbjct 105597 ATGCAAATTTTCGTTAAAACATTGACTGGAAAGACCATTACATTGGAAGTTGAGGCATCG 105656
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || ||| | | ||| |||||||| |||||||||||||| ||||| ||||||
Sbjct 105657 GACACGATCGAAAATGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCTCCAGATCAA 105716
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | ||||| || | || ||||| || |||||||| | || | | || || |||
Sbjct 105717 CAGAGGTTAATCTTTGCCGGAAAACAGCTGGAAGATGGTCGTACACTTTCTGACTACAAT 105776
Query 391230 ATTGATAAGGATGCAAC 391246
||| | || || ||||
Sbjct 105777 ATTCAGAAAGAATCAAC 105793
Score = 118 bits (130), Expect = 4e-21
Identities = 145/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| |||||||| |||||||| || || || ||| | || || || | ||
Sbjct 104912 AATGCAGATTTTTGTTAAAACCCTGACTGGAAAGACCATCACTTTGGAGGTAGAGGCTTC 104971
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
||||| ||||| | | ||| |||||||||||||| ||||| || || || |||||
Sbjct 104972 TGATACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGATCA 105031
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|| | || || || | || || |||||||| ||||| | ||| | | ||||||||
Sbjct 105032 GCAGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACTCTCTCAGATTATAA 105091
Query 391229 TATTGATAAGGATGCAAC 391246
|||| | ||||| ||||
Sbjct 105092 TATTCAAAAGGAATCAAC 105109
Score = 104 bits (114), Expect = 9e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108
|||| | ||||| || ||||| || || || ||||| || || | || || || | ||
Sbjct 105140 AATGCAGATTTTTGTCAAAACTCTCACAGGAAAAACCATCACATTGGAAGTCGAGGCTTC 105199
Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168
|| | || ||| | ||| |||||||||||||||||||||||||||||| |||||
Sbjct 105200 GGACACGATCGAAAACGTCAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCGGATCA 105259
Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
||| | || || || | || ||||||||||| || || | || | | ||||| ||
Sbjct 105260 GCAAAGATTGATCTTTGCTGGCAAACAACTTGAGGACGGTCGCACACTTTCTGATTACAA 105319
Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | || || |||| | || |||||
Sbjct 105320 CATTCAAAAAGAATCAACGTTGCATTTAGT 105349
Score = 84.2 bits (92), Expect = 9e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| ||||||||| |||| || || || || || | || |||||| | ||
Sbjct 105369 ATGCAAATTTTTGTTAAAACATTGACGGGAAAGACCATCACATTGGAGGTTGAAGCGTCA 105428
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | || || | ||| |||||||| |||||||||||||| || || |||||
Sbjct 105429 GACACGATCGAGAACGTCAAAGCCAAAATTCAGGATAAGGAAGGAATCCCACCGGATCAG 105488
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| | || || ||| | || || || || || || || | || | | ||||||||
Sbjct 105489 CAGAGGTTGATCTTCGCCGGAAAGCAGCTAGAGGACGGCCGCACGCTTTCAGATTATAAC 105548
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
||| | || || |||| | || |||||
Sbjct 105549 ATTCAAAAAGAATCAACGTTGCATTTAGT 105577
>seq11428
Length=72031
Score = 84.2 bits (92), Expect = 9e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
||||| || || || || ||||| |||||||| | || |||| ||||||||||||||
Sbjct 20477 GCAGTCATCACAGTACCGGCTTACTTCAATGACTCTCAGAGGCAGGCAACTAAAGATGCC 20418
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| |||||||||| | ||||| || | || || || || || || || || || ||
Sbjct 20417 GGCGCTATTGCTGGTCTGAATGTCCTCAGGATAATAAACGAGCCCACGGCCGCCGCGATA 20358
Query 451442 GCATATGGACT 451452
|| ||||| ||
Sbjct 20357 GCGTATGGTCT 20347
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975411190606688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |