Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq2842 150 6e-32 >seq2842 Length=3006 Score = 150 bits (166), Expect = 6e-32 Identities = 155/201 (77%), Gaps = 4/201 (2%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| ||||| ||||||||||| ||||||||||||| ||| | |||||||| ||||||| Sbjct 1760 ACGGCAAGCTCAGCTGCCAGCTGTACCAGCGCAGCGGTGACATCTTCCTCGGTGTGCCGT 1819 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTT--CGCGGACCAGCTCGGACTGAA 24937 |||| ||||| |||||||||||||||||||| | | ||| | ||| ||| ||| Sbjct 1820 TCAACATCGCCAGCTACGCGCTGCTGACCCACATGGTGGCGCAGGCCA--CCGGCCTGGG 1877 Query 24938 GGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCA 24997 || ||||| ||| | || || |||| |||||||| ||||||||| ||||||| Sbjct 1878 CGTGGGCGACTTCGTGCATACGCTGGGTGACGCGCACCTGTACTCGAACCACTTCGAGCA 1937 Query 24998 GGCGACCGAACAACTGTCGCG 25018 ||| ||| || |||||||| Sbjct 1938 GGCCCGCGAGCAGCTGTCGCG 1958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164149140236928