Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq8239 172 8e-38 >seq8239 Length=1603 Score = 172 bits (190), Expect = 8e-38 Identities = 161/205 (79%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 140357 CATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGAT 140416 |||||||||||||||||| ||||| || |||||||||||||| || || ||||||||| Sbjct 1596 CATGCCGCAGCCGATGTCGACGCCGACCGCCGCCGGGATGATCGCACCGCGGGTCGGGAT 1537 Query 140417 CACCGAGCCCACGGTCGAGCCGATGCCCATGTGGACGTCCGGCATCAGGGCCACATGCGA 140476 ||||||||||||||||| ||| |||||| ||| ||||||||||||| |||||| || Sbjct 1536 CACCGAGCCCACGGTCGCGCCCTTGCCCAGGTGCACGTCCGGCATCACGGCCACCCACGG 1477 Query 140477 GTGGATGAACGGCAGGGCGGCGAGGTTGTGCGCCTGCACCTGGGCGGGCTGCTCGAAGGT 140536 || |||||| | ||||||| |||| || |||| | || || || ||| | | Sbjct 1476 CCCGACGAACGGGATCGCGGCGATGTTGCGCAGCTGCTCATGCGCCTGCGCCTCCAGCGG 1417 Query 140537 CACACCCCGGACCCAGGCCTTGATC 140561 |||||| ||||||| |||||||| Sbjct 1416 CACACCGTTGACCCAGCCCTTGATC 1392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715667416780800