Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_019708.1
Length=37595
Score E
Sequences producing significant alignments: (Bits) Value
seq2486 181 3e-41
seq7345 91.5 4e-14
>seq2486
Length=3064
Score = 181 bits (200), Expect = 3e-41
Identities = 279/398 (70%), Gaps = 0/398 (0%)
Strand=Plus/Plus
Query 8311 GGCGCGTTTACCGGTCGCCCGGTTGAGAAAGAAATCACCTGGACGCAAGGCGATaaaaaa 8370
|| ||||| || || || || || ||||| || ||| ||||| ||| ||||| | ||
Sbjct 183 GGTGCGTTCACTGGCCGGCCAGTGGAGAAGGAGATCCGCTGGAAGCAGGGCGACGAGGAA 242
Query 8371 aTCACCGCGACCGTGTATGTTCGCCCGATGGGTTATCACACAGCAACGTCCGATGTGCTG 8430
| ||||| ||||||||||| || ||| |||||| || | || |||||| ||||||
Sbjct 243 CTGACCGCCACCGTGTATGTGCGGCCGCTGGGTTTCCAGGCGGCGGTGTCCGACGTGCTG 302
Query 8431 GCTTTTGGTGGTAAGGTCGATGGTGTGGCAGGGCGTATCGCCGCATCCATCTGCGATGAA 8490
| ||| ||| || ||||| || || ||||| || ||||||||| ||
Sbjct 303 TCGGCCACGAACAAGCACGACGGCGTGGCCGGCCGCATCGCGGCCAGCATCTGCGACGAG 362
Query 8491 CATGGTAAACCCATCTTCACCCCGGCTGACATTACTGGTGAGGCAGATCCTGAACGTGGT 8550
|| || || || | |||||| || |||||||| || || || ||||| || || ||
Sbjct 363 CACGGCAAGGCCGTTTTCACCGTCGCGGACATTACGGGCGAAGCCGATCCGGAGCGCGGC 422
Query 8551 GCACTGGATGGCGGCCTGACGGTAGCACTGCTTCTGGCCATTCAGGAAGTTAACGATCTG 8610
|| ||||| ||| |||| |||| || ||||| ||||||| || || ||| | |||
Sbjct 423 GCCCTGGACGGCAACCTGTCGGTGGCGCTGCTGATGGCCATCGGCGAGGTGAACAACCTG 482
Query 8611 GGAAAGACTTCGAGCTCAGCGCCGAAGACGAATTCTGGTGCGAGCTCGTCCTCAACGGAA 8670
||||| || |||||| | | | || || || | ||||||||||| ||||| || || |
Sbjct 483 GGAAAAGCTACGAGCTGACCCCGGAGGATGAGCTGTGGTGCGAGCTGGTCCTGAATGGGA 542
Query 8671 TCGGAGGCAGAACAATCGCCGAAGCGCGGGAAGTCCTC 8708
|||| ||| | | ||||| || || |||| ||||
Sbjct 543 TCGGCGGCCGCAGCATCGCTGAGGCAATGGAATGCCTC 580
>seq7345
Length=15758
Score = 91.5 bits (100), Expect = 4e-14
Identities = 86/107 (80%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 14770 ATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGACGCCAAACTGCGCTA 14828
|||| |||||| ||| || | || | ||| |||||||||||| ||||| || ||||||||
Sbjct 7857 ATCGCCGACACCATGCTGATCGCCG-GCTACACCGAGGTGATCGACGCGAAGCTGCGCTA 7915
Query 14829 CCCGAACACCGCGCTGCTCTACGTCGAATTCGACTCAAGCCAGTTCA 14875
||||||||| || ||||| |||||||| ||| | || |||||||
Sbjct 7916 CCCGAACACGGCCCTGCTGTACGTCGAGTTCAGCGCAGAGCAGTTCA 7962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120165079913424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |