Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq7345 87.8 5e-13 >seq7345 Length=15758 Score = 87.8 bits (96), Expect = 5e-13 Identities = 85/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 15048 ATCGGCGACACGATGATGCT-GCAGAGCTTCACCGAGGTGATTGATGCCAAACTGCGCTA 15106 |||| |||||| ||| || | || | ||| |||||||||||| || || || |||||||| Sbjct 7857 ATCGCCGACACCATGCTGATCGCCG-GCTACACCGAGGTGATCGACGCGAAGCTGCGCTA 7915 Query 15107 CCCGAACACCGCGCTGCTCTACGTCGAATTCGACTCAAGCCAGTTCA 15153 ||||||||| || ||||| |||||||| ||| | || ||||||| Sbjct 7916 CCCGAACACGGCCCTGCTGTACGTCGAGTTCAGCGCAGAGCAGTTCA 7962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126509765417280