Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_019722.1
Length=41351
Score E
Sequences producing significant alignments: (Bits) Value
seq8165 96.9 9e-16
>seq8165
Length=1351
Score = 96.9 bits (106), Expect = 9e-16
Identities = 288/437 (66%), Gaps = 17/437 (4%)
Strand=Plus/Plus
Query 14934 CGACATGATCGCGGACAGCCT--AGTTCGCAATCACCTGTGGGCGGTTGACCGCAACATC 14991
|||||| || || |||||||| || ||| || |||||||| || |||||| ||||
Sbjct 201 CGACATCATTGCCGACAGCCTCGAGGCCGCC--CATCTGTGGGCCGTCGACCGCGGCATC 258
Query 14992 ACCAAAACCTACGTCGAAGACGTGACGGAAGGGGTGAACAACTACCTGCGCCACCTCAAA 15051
| ||| ||||||||||| |||||| || || || || || ||||||| ||| ||
Sbjct 259 AGCAAGACCTACGTCGACGACGTGCGTGAGGGTGTCAATGCCTTCCTGCGCGGCCTGAAG 318
Query 15052 AACATCGGTGCGATTGCCGGTGGTGAGTGCTGGGTGGACCCGGAGCTGAATAGCCCCGAC 15111
| | |||||||| ||| || | |||||||| ||||| || ||||| | |||
Sbjct 319 ACCCAGGGTGCGATCCTCGGCGGCAACTGCTGGGTCGACCCCGACCTGAACGCAGCGGAC 378
Query 15112 CAAATTCAACAGGGTAAAGTCTACTTCGATTATGACTTTAGC---GCCTACGCGCCTGCA 15168
| ||||| |||||| || | ||||| | | ||||| || |
Sbjct 379 AGCGTGGCCCAGGGCCGCTTCTACTGGGACTTCGACTTCACCCCGACCTAC---CCGGGT 435
Query 15169 GAGCACATCACGTTCCGCAGCCATATGGTTAACGGCTATCTGACGGAGGTTGTGTAAG-A 15227
||||| | || ||||||| || ||| ||| ||| | ||||| | | |||| |
Sbjct 436 GAGCAGCTGACCTTCCGCATGCACATGAACAACAACTACGTCTCGGAGATCTTCTAAGCA 495
Query 15228 TGCTACCGCAAGTAATCCGAGCAA---TGAACCTGTTCGCTGACGGTAAAGGCTATGCAG 15284
|| |||||| ||||| || | || | | || ||||| || || ||||| |
Sbjct 496 TG-GCGCGCAAG--ATCCGCAAAAACTTCAATTTCTACGTCGACGGCAAGGGTTATGCCG 552
Query 15285 GTGTGGTGGAGGAAGTGACCCCTCCAAAACTGACTCTCAAGACCGAGGAGTTCAAGGCAG 15344
| ||| | | ||| |||| || ||||| || ||||||||||| ||| |||| |
Sbjct 553 GCAGCGTGATGACCTTCACCGCTCCCAAGCTGACGCTGAAGACCGAGGACTTCCAGGCCG 612
Query 15345 GGGGCATGGACGCCCCG 15361
| |||||| ||| |||
Sbjct 613 GCGGCATGCTCGCACCG 629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132182547766416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |