Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_019722.1 Length=41351 Score E Sequences producing significant alignments: (Bits) Value seq8165 96.9 9e-16 >seq8165 Length=1351 Score = 96.9 bits (106), Expect = 9e-16 Identities = 288/437 (66%), Gaps = 17/437 (4%) Strand=Plus/Plus Query 14934 CGACATGATCGCGGACAGCCT--AGTTCGCAATCACCTGTGGGCGGTTGACCGCAACATC 14991 |||||| || || |||||||| || ||| || |||||||| || |||||| |||| Sbjct 201 CGACATCATTGCCGACAGCCTCGAGGCCGCC--CATCTGTGGGCCGTCGACCGCGGCATC 258 Query 14992 ACCAAAACCTACGTCGAAGACGTGACGGAAGGGGTGAACAACTACCTGCGCCACCTCAAA 15051 | ||| ||||||||||| |||||| || || || || || ||||||| ||| || Sbjct 259 AGCAAGACCTACGTCGACGACGTGCGTGAGGGTGTCAATGCCTTCCTGCGCGGCCTGAAG 318 Query 15052 AACATCGGTGCGATTGCCGGTGGTGAGTGCTGGGTGGACCCGGAGCTGAATAGCCCCGAC 15111 | | |||||||| ||| || | |||||||| ||||| || ||||| | ||| Sbjct 319 ACCCAGGGTGCGATCCTCGGCGGCAACTGCTGGGTCGACCCCGACCTGAACGCAGCGGAC 378 Query 15112 CAAATTCAACAGGGTAAAGTCTACTTCGATTATGACTTTAGC---GCCTACGCGCCTGCA 15168 | ||||| |||||| || | ||||| | | ||||| || | Sbjct 379 AGCGTGGCCCAGGGCCGCTTCTACTGGGACTTCGACTTCACCCCGACCTAC---CCGGGT 435 Query 15169 GAGCACATCACGTTCCGCAGCCATATGGTTAACGGCTATCTGACGGAGGTTGTGTAAG-A 15227 ||||| | || ||||||| || ||| ||| ||| | ||||| | | |||| | Sbjct 436 GAGCAGCTGACCTTCCGCATGCACATGAACAACAACTACGTCTCGGAGATCTTCTAAGCA 495 Query 15228 TGCTACCGCAAGTAATCCGAGCAA---TGAACCTGTTCGCTGACGGTAAAGGCTATGCAG 15284 || |||||| ||||| || | || | | || ||||| || || ||||| | Sbjct 496 TG-GCGCGCAAG--ATCCGCAAAAACTTCAATTTCTACGTCGACGGCAAGGGTTATGCCG 552 Query 15285 GTGTGGTGGAGGAAGTGACCCCTCCAAAACTGACTCTCAAGACCGAGGAGTTCAAGGCAG 15344 | ||| | | ||| |||| || ||||| || ||||||||||| ||| |||| | Sbjct 553 GCAGCGTGATGACCTTCACCGCTCCCAAGCTGACGCTGAAGACCGAGGACTTCCAGGCCG 612 Query 15345 GGGGCATGGACGCCCCG 15361 | |||||| ||| ||| Sbjct 613 GCGGCATGCTCGCACCG 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132182547766416