Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq2842 181 2e-40 >seq2842 Length=3006 Score = 181 bits (200), Expect = 2e-40 Identities = 203/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 122391 ACGTTCGTGACAACGGGCACGAAAA-AGCAGACCGTACGGGCACGGGCACCCTGTCGTTA 122449 |||| | ||| |||| ||| || ||| ||||| || || || || |||| | Sbjct 1322 ACGTGCTTGAACACGGCGCCGAGAAGAGC-GACCGCACCGGTACCGGTACCCGCAGCGTG 1380 Query 122450 TTCGGCGCACAAATGCGCTTTGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAG 122509 |||||| || |||||||| ||||| | |||| |||||||||||||| ||||| ||| Sbjct 1381 TTCGGCTGGCAGATGCGCTTCGACCTCAACGAAGGCTTCCCGCTGGTCACCACCAAGAAG 1440 Query 122510 GTTCACCTCCGCTCCATCATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATC 122569 | ||||| ||||| |||||||| ||||| ||||||||||| | |||||| ||||||||| Sbjct 1441 CTGCACCTGCGCTCGATCATCCACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATC 1500 Query 122570 CAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAAT 122629 || ||||| |||||| | || | |||||||| || ||||| || || |||| | Sbjct 1501 GGCTACCTGAAGGACAACCAGGTGCGGATCTGGGACGAGTGGGCCGACGAGAATGGCGAC 1560 Query 122630 CTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||||||||| ||||| | ||| ||||| Sbjct 1561 CTCGGCCCGGTCTACGGCAGGCAGTGGCG 1589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777514033225600