Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq2842 181 2e-40
>seq2842
Length=3006
Score = 181 bits (200), Expect = 2e-40
Identities = 190/247 (77%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 98945 GAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAA 99004
||||| ||||| |||||||| || || | | |||||| |||||||| ||| |
Sbjct 1344 GAAGAGCGACCGCACCGGTACCGGTACCCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGA 1403
Query 99005 CTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAG-CGTTGCCACCTGCGCTCTATTATCC 99063
| | | ||||| ||||||||||| || |||||| | || ||||||||||| || ||||
Sbjct 1404 CCTCAACGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTG-CACCTGCGCTCGATCATCC 1462
Query 99064 ATGAACTGCTGTGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTG 99123
| || ||||||||||||||||| ||||||||||| ||| |||||||| || || |
Sbjct 1463 ACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTGAAGGACAACCAGG 1522
Query 99124 TAACCATTTGGGACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGC 99183
| || |||||||| ||||| ||| | |||||||||||||| ||||| ||||| | ||
Sbjct 1523 TGCGGATCTGGGACGAGTGGGCCGACGAGAATGGCGACCTCGGCCCGGTCTACGGCAGGC 1582
Query 99184 AGTGGCG 99190
|||||||
Sbjct 1583 AGTGGCG 1589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716528086197440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |