Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq10593 93.3 5e-14
>seq10593
Length=94130
Score = 93.3 bits (102), Expect = 5e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460
||||| | ||| |||| ||||| ||||| | || ||| | || | |||| |||||||
Sbjct 2376 GAACTGCTGTGGTTTATCAAAGGATCAACAAACTCGAAAGAGTTGACAGATAAAGGTGTT 2317
Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520
| ||||| |||| |||||||| || | || || || | | || || ||||| ||
Sbjct 2316 CATATTTGGGATGAGAATGGTTCGCGGGCTTTCTTGGACTCCTATGGTTTCACTGATAGG 2257
Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580
|||| || ||||| || || | ||||| || || ||| | || || || ||||
Sbjct 2256 GAAGAGGGCGATTTGGGACCTGTCTATGGTTTCCAGTGGCGGCACTTTGGCGCCGAATAC 2197
Query 172581 ATCGAC-TGTGATACAGATTACACAGGACAAGG 172612
| ||| || | ||| |||||||||||||||||
Sbjct 2196 AAAGACATGCG-TACGGATTACACAGGACAAGG 2165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632393651327680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |