Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_022058.1 Length=52519 Score E Sequences producing significant alignments: (Bits) Value seq7345 86.0 2e-12 >seq7345 Length=15758 Score = 86.0 bits (94), Expect = 2e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 42887 CCGGTCTTGCGGATCGTCGGCAGGACGACCGCCGTGACCCACTTCTTGAAGGCTTTCGCC 42946 |||||||||||||| | || || || | | || ||||||||||||||| |||||| Sbjct 4744 CCGGTCTTGCGGATGGCTGGGAGCACTTCGCCGGTTACCCACTTCTTGAAGAGCTTCGCC 4685 Query 42947 TCGGGCTTGCGGCTGCGGAGGATGAGCGAGTAGAGCCCAGACTCGTT 42993 || ||||||| || || |||||| || ||| || ||||||||||| Sbjct 4684 TCTTGCTTGCGACTACGCAGGATGGCCGCGTATAGGCCAGACTCGTT 4638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167914997442192