Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_022086.1 Length=50690 Score E Sequences producing significant alignments: (Bits) Value seq3805 86.0 2e-12 >seq3805 Length=3888 Score = 86.0 bits (94), Expect = 2e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 4315 CAGTAGCTCAACTGGAAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTC 4374 ||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 2181 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 2240 Query 4375 CCTGGCCTGC 4384 |||||| ||| Sbjct 2241 CCTGGCGTGC 2250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162063040918464