Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq8165 291 2e-74
>seq8165
Length=1351
Score = 291 bits (322), Expect = 2e-74
Identities = 617/908 (68%), Gaps = 27/908 (3%)
Strand=Plus/Plus
Query 15143 ATCGACTTCACGCTGGGCGATTCCAGCTCGCGCGCCAACCTGCTGAACGAAGCAAAGGTG 15202
||||||||| || |||| | ||| |||||||||||||||||| || | || |||
Sbjct 46 ATCGACTTCGGTCTCTCCGATGCGAGCAGCCGCGCCAACCTGCTGAACCAATCGAACGTG 105
Query 15203 GCGACCATCATTCGCGAGGACGGTTTCCGCCTGTGGGGCAACCGCACCCTGTCGAGCGAT 15262
||||||||||| ||||| | || |||||||||||||||||||| ||| |||||
Sbjct 106 GCGACCATCATCCGCGAAGGTGGCTTCCGCCTGTGGGGCAACCGTACCGCCAGCAGCGAC 165
Query 15263 CAAAAGTGGGCGTTCCTGTGCGTGCGCCGCACCGCCGACATCATCAACGACAGCATCCTG 15322
|| |||||| ||||||||| ||| ||||| ||||||||||| ||||||| || |
Sbjct 166 CAGAAGTGGCAGTTCCTGTGTGTGGTGCGCACTGCCGACATCATTGCCGACAGCCTCGAG 225
Query 15323 GTGAACCACCTGTGGGCCGTGGATCGCGGCATCACCAAGCAGTACATCGAAGACGTGGTG 15382
| ||| ||||||||||| || |||||||||| |||| ||| |||| ||||||
Sbjct 226 GCCGCCCATCTGTGGGCCGTCGACCGCGGCATCAGCAAGACCTACGTCGACGACGTGCGT 285
Query 15383 GAAGGCGTGAACGCCTACCTGCGCCACCTGGTCAGCATCGGCGCCATCCTGGGCGGCACC 15442
|| || || || |||| ||||||| |||| | | || || ||||| ||||||| |
Sbjct 286 GAGGGTGTCAATGCCTTCCTGCGCGGCCTGAAGACCCAGGGTGCGATCCTCGGCGGCAAC 345
Query 15443 TGCTGGGCCGACCCTGACGTGAACACGCCCGACCAGATCGCGCAGGGTAAGGTATACTTC 15502
||||||| |||||| ||| ||||| | | ||| | || ||||| | ||||
Sbjct 346 TGCTGGGTCGACCCCGACCTGAACGCAGCGGACAGCGTGGCCCAGGGCCGCTTCTACTGG 405
Query 15503 GATTTCGATTTTACCGCTGTCTATCCGGCTGAGCACATCATCATGCGCAGCCAACTGGTT 15562
|| ||||| || ||| | ||| |||| |||||| | | | | |||| || ||
Sbjct 406 GACTTCGACTTCACCCCGACCTACCCGGGTGAGCAGCTGACCTTCCGCATGCACATGAAC 465
Query 15563 AACGATTACATCGTGGAGATTTTCGAATAATGGCCGCTCGCGACGTTCGGAAGAACTTTA 15622
||| | ||| || |||||| ||| || ||| || ||| | | || || ||||| |
Sbjct 466 AACAACTACGTCTCGGAGATCTTCTAAGCATG---GCGCGCAAGATCCGCAAAAACTTCA 522
Query 15623 ACCTGTTCGTGGATGGCCGGGGCTATGCCGGCCAGGCCGACGA-ATTCAACGCGCCCAAG 15681
| | | ||| || ||| ||| |||||||| ||| || || |||| ||| ||||||
Sbjct 523 ATTTCTACGTCGACGGCAAGGGTTATGCCGG-CAGCGTGATGACCTTCACCGCTCCCAAG 581
Query 15682 CTGGCAACCGTGGA-AGAGGAATTCCGGGCTGGCGGCATGGACGCGCCAATTGACGT-GA 15739
||| | | | || ||||| |||| ||| ||||||||| ||| || | || | |
Sbjct 582 CTGAC-GCTGAAGACCGAGGACTTCCAGGCCGGCGGCATGCTCGCACCGACCGAAATCGT 640
Query 15740 CCATGGGCATGCAGAAGCTGAC-----GTGTGACTTCAGCCTGTTTGCCTATGACCGCAA 15794
|| || || | | |||||||| ||||||| |||| || ||||| |
Sbjct 641 CCTCGGCCACG-AAAAGCTGACTGCCGAAGTGACTTTCGCCT-----CCGATGACGCGGA 694
Query 15795 CGTGCTGGCGCTGTTCGGCGTCGTCAATGGCAATGCCGTTCCGC-TGACTGTGCGCGAGG 15853
| || | |||| |||| || | |||| | || | || | || | |||||||
Sbjct 695 GATCATGTCCAAGTTCCACGTCATCGAAAGCAA-GGAGTACGGCTTCACCGCCCGCGAGG 753
Query 15854 GCCTGGAGTCGTTCGACGGCAC---CGCCAAGGCTGTGGTTCACACCATGCGCGGCAAAA 15910
||||| | |||||| || | || || || || |||| ||||||||||||
Sbjct 754 CGCTGGAAGCCGACGACGGTACGGTCTCCCAG---GTCGTGCACAACATGCGCGGCAAGG 810
Query 15911 TCACCGAGCTGGACCCAGGCACCAGCAAGCCTGGCGAGCTTCCACCGCTGAAGGCCACCA 15970
| | |||||| | ||| | |||| |||||| || | |||| | |
Sbjct 811 TGAAGTCGCTGGATCGCGGCGAGACCAAGGTCGGCGAGAAGGGCACGGTCAAGGTCGGCC 870
Query 15971 TGTCGCTGACGTATTACAAGCTGACCCACGACGGCCAGGTGATCCACGAAATCGACGTGG 16030
|| |||||| || |||||||||||||| | || |||||| | || || |||||||||
Sbjct 871 TGGCGCTGAGCTACTACAAGCTGACCCATGGCGCGCAGGTGGTGCAGGAGATCGACGTGA 930
Query 16031 AAAACATG 16038
||||||
Sbjct 931 CCAACATG 938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139263127201632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |