Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq7200 109 9e-19
seq9711 96.9 5e-15
seq6771 93.3 7e-14
>seq7200
Length=105881
Score = 109 bits (120), Expect = 9e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| | || ||||| || || ||| | || ||||| | |
Sbjct 104914 TGCAGATTTTTGTTAAAACCCTGACTGGAAAGACCATCACTTTGGAGGTAGAGGCTTCTG 104973
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| ||| ||||| ||| |||||||||||| ||||| ||||| |
Sbjct 104974 ATACGATTGAGAATGTCAAAGCGAAAATTCAAGATAAAGAAGGCATCCCACCAGATCAGC 105033
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | || ||||| || || ||| | || ||| | | || | ||||||||||||
Sbjct 105034 AGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACTCTCTCAGATTATAATA 105093
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| || | ||||| ||
Sbjct 105094 TTCAAAAGGAATCAACCTTGCATTTGGT 105121
Score = 96.9 bits (106), Expect = 5e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| | ||||||||||| || || | || || || | |
Sbjct 105142 TGCAGATTTTTGTCAAAACTCTCACAGGAAAAACCATCACATTGGAAGTCGAGGCTTCGG 105201
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || |||| || ||| ||||| ||| ||| ||||| ||||| || ||||| |
Sbjct 105202 ACACGATCGAAAACGTCAAAGCAAAAATTCAAGATAAGGAAGGAATTCCTCCGGATCAGC 105261
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || ||||| || |||||| | || || | | || | | ||||| || |
Sbjct 105262 AAAGATTGATCTTTGCTGGCAAACAACTTGAGGACGGTCGCACACTTTCTGATTACAACA 105321
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| || | |||||||| | ||||| | || ||||
Sbjct 105322 TTCAAAAAGAATCAACGTTGCATTTAGTTCTCCGATTGCGTGGTGGTA 105369
>seq9711
Length=151070
Score = 96.9 bits (106), Expect = 5e-15
Identities = 157/226 (69%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || ||||| || ||||| || || | || || || | |
Sbjct 104249 TGCAGATATTTGTCAAGACTTTAACTGGCAAAACTATAACACTAGAGGTCGAGGCTTCGG 104308
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | || || || ||||| ||| ||||| |||||||| |||||||| |
Sbjct 104309 ACACAATCGAGAACGTGAAGGCGAAAATTCAAGACAAAGAGGGCATTCCTCCCGATCAGC 104368
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| ||||| || || |||||| | || || |||| || | || || ||||
Sbjct 104369 AAAGACTGATTTTCGCTGGCAAACAACTCGAGGACGGACGAACTTTGTCCGACTACAATA 104428
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| || |||| | ||| | ||| | ||||| ||
Sbjct 104429 TTCAAAAAGAATCCACACTCCACCTTGTACTTCGACTTAGAGGTGG 104474
>seq6771
Length=7421
Score = 93.3 bits (102), Expect = 7e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| ||||||| | || || ||||| || || | || || ||| | |
Sbjct 96 TGCAGATCTTCGTAAAAACTCTCACTGGTAAAACTATCACCCTCGAAGTTGAAGCTTCAG 155
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| | ||||| ||| ||| || ||| |||||||||||||| || ||||| |
Sbjct 156 ACACTATAGAGAATGTCAAAGCTAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCAGC 215
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || |||||||| || |||||| | || ||| ||||| | | || ||||| |
Sbjct 216 AGCGTCTAATTTTTGCTGGCAAACAACTTGAAGATGGCAGAACTCTTTCCGACTATAACA 275
Query 146212 TACAAAAAGAATCGAC 146227
| || || ||||| ||
Sbjct 276 TCCAGAAGGAATCTAC 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786047138557120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |