Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_023555.1
Length=43017
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 86.0 2e-12
>seq7345
Length=15758
Score = 86.0 bits (94), Expect = 2e-12
Identities = 241/361 (67%), Gaps = 8/361 (2%)
Strand=Plus/Plus
Query 6038 CACGGAGGTTATCGACGCACGTTTTCGATACCCGCATACCGCCTTGTTGTTTATCGAGTT 6097
||| ||||| |||||||| | || |||||| | || ||| || ||| |||||||
Sbjct 7886 CACCGAGGTGATCGACGCGAAGCTGCGCTACCCGAACACGGCCCTGCTGTACGTCGAGTT 7945
Query 6098 CAACGCAAAATCATTCCAG-AATATCCCGAAAATATC-GT-GCCTGGCCAAAGGGCGTAT 6154
|| |||| | || | ||| || || ||| | | || | ||| | ||||| |
Sbjct 7946 CAGCGCAGAG-CAGTTCAGCAACATTCCGGCTGTCACAGTCGACTGCCGC--GGGCGGAA 8002
Query 6155 TATCCGAGTACCAAGTAACTATGACCCAGACACCCGCACCTATTCCGGCAATTGGGATGG 6214
||| ||| || || || || || || || ||||| |||| ||||| ||||| ||
Sbjct 8003 GGTCCAAGTGCCGAGCAATTACGATCCGGAGACCCGGGCCTACCTCGGCATCTGGGACGG 8062
Query 6215 GTCGTTTAAATGGGCCTACACCAACAATCCGGCGTGGGTATGGTACGACGTATTGACTCA 6274
|| | ||| ||||| ||| |||| |||| ||| |||||| | |||| ||
Sbjct 8063 CACGATGAAACAGGCCTGGACCGACAACCCGGTCTGGCACACCTACGACATCGTGAC-CA 8121
Query 6275 ACCG-CGGTTCGGGCTTGGTAAGCGCGTTACGGCGGCCATGCTAGATAAATGGGAGTTGT 6333
|| || ||||| | ||||| ||| | | ||| ||| |||| |||||| |||
Sbjct 8122 ACGATCGCTTCGGTGTGGGTAAACGCATCAAGGCCTGGATGGTAGACCGTTGGGAGATGT 8181
Query 6334 ACCGCATCGCACAGCGCTGCGATCAGATGGTGCCGGATGGTGCCGGTGGTGTTGAGCCGC 6393
|||| || | ||| |||||| ||| ||||||||||||| ||||| |||||||
Sbjct 8182 ACCGGATTTCCCAGTACTGCGACCAGTTGGTGCCGGATGGGAAGGGTGGCCAGGAGCCGC 8241
Query 6394 G 6394
|
Sbjct 8242 G 8242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137512979460528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |