Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_023588.1 Length=33525 Score E Sequences producing significant alignments: (Bits) Value seq5799 168 1e-37 >seq5799 Length=4753 Score = 168 bits (186), Expect = 1e-37 Identities = 261/373 (70%), Gaps = 0/373 (0%) Strand=Plus/Plus Query 32570 CTACCCCTGCCAGCCGAAAGGCGGCTCGATGTGCAGCTTCTTCAACCTGTTCGCCCGCAC 32629 |||| || |||| | || ||| ||| ||| | ||| ||| | |||||||| || Sbjct 1176 CTACTCCATCCAGGCAAATGGCCGCTTCATGGTCTCCTTGGCCAATCGGTTCGCCCTTAC 1235 Query 32630 CGCCTCTCGATAGGCCTCGATCTTGGCCACATCCTCGCGCAGGCGGGTCTCGTGCCTGGT 32689 || || | || ||||| ||||| |||| ||||| | | ||||||||||| Sbjct 1236 GGCTTCCCTCCAGCGAGAGATCTCAGCCACGTCCTGCCGCAGCCTCGCCTCGTGCCTGGC 1295 Query 32690 CACCCACATCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCTACACCGGCGGGACGGCCC 32749 |||||||||||| ||||||||||| || |||||||||||||| || | |||| | ||||| Sbjct 1296 CACCCACATCTCGGCGCCGGCGCGACCTTGCTCGTAACTGCTGCATCTGCGGAAAGGCCC 1355 Query 32750 GCCGGGACCATGCCGATGCCGGTCGAGACTGGCAATCCAGATCCCATCGTTCACCCGTCG 32809 ||||| ||||||||||| || || || |||||||| | |||| || || | Sbjct 1356 TCCGGGCCCATGCCGATGGCGATCCAGCGACGCAATCCACGTGTGGTCGTCTACACGCTG 1415 Query 32810 TAGCAGTACGACCACCCACACGCCACTGCAAGCGATGACCGTGGGGGCATCGTCGGGGAG 32869 || |||| ||||||||| ||| ||||| || || ||| ||||| | Sbjct 1416 GGACATGCTCACCAACCACACGCCCTCGCACGCGATCACGGTCAGGGGTTCGTCCGCCTT 1475 Query 32870 GCTGGCAGAGCGCGTCGTCCAGTAGAAGTCGGGGGGCAGCGGCATGGCCGGCAGGATACG 32929 || ||| |||| || |||||||||||| ||| || | ||||| ||| |||||||| Sbjct 1476 GCCGGCGGAGCTTGTTGTCCAGTAGAAGGATTCGGGAAGTGACATGGACGGGAGGATACG 1535 Query 32930 GCTGGGCGTCGCA 32942 ||| |||||| Sbjct 1536 AATGGCGGTCGCA 1548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107142956867184