Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_023588.1
Length=33525
Score E
Sequences producing significant alignments: (Bits) Value
seq5799 168 1e-37
>seq5799
Length=4753
Score = 168 bits (186), Expect = 1e-37
Identities = 261/373 (70%), Gaps = 0/373 (0%)
Strand=Plus/Plus
Query 32570 CTACCCCTGCCAGCCGAAAGGCGGCTCGATGTGCAGCTTCTTCAACCTGTTCGCCCGCAC 32629
|||| || |||| | || ||| ||| ||| | ||| ||| | |||||||| ||
Sbjct 1176 CTACTCCATCCAGGCAAATGGCCGCTTCATGGTCTCCTTGGCCAATCGGTTCGCCCTTAC 1235
Query 32630 CGCCTCTCGATAGGCCTCGATCTTGGCCACATCCTCGCGCAGGCGGGTCTCGTGCCTGGT 32689
|| || | || ||||| ||||| |||| ||||| | | |||||||||||
Sbjct 1236 GGCTTCCCTCCAGCGAGAGATCTCAGCCACGTCCTGCCGCAGCCTCGCCTCGTGCCTGGC 1295
Query 32690 CACCCACATCTCAGCGCCGGCGCGGCCCTGCTCGTAACTGCTACACCGGCGGGACGGCCC 32749
|||||||||||| ||||||||||| || |||||||||||||| || | |||| | |||||
Sbjct 1296 CACCCACATCTCGGCGCCGGCGCGACCTTGCTCGTAACTGCTGCATCTGCGGAAAGGCCC 1355
Query 32750 GCCGGGACCATGCCGATGCCGGTCGAGACTGGCAATCCAGATCCCATCGTTCACCCGTCG 32809
||||| ||||||||||| || || || |||||||| | |||| || || |
Sbjct 1356 TCCGGGCCCATGCCGATGGCGATCCAGCGACGCAATCCACGTGTGGTCGTCTACACGCTG 1415
Query 32810 TAGCAGTACGACCACCCACACGCCACTGCAAGCGATGACCGTGGGGGCATCGTCGGGGAG 32869
|| |||| ||||||||| ||| ||||| || || ||| ||||| |
Sbjct 1416 GGACATGCTCACCAACCACACGCCCTCGCACGCGATCACGGTCAGGGGTTCGTCCGCCTT 1475
Query 32870 GCTGGCAGAGCGCGTCGTCCAGTAGAAGTCGGGGGGCAGCGGCATGGCCGGCAGGATACG 32929
|| ||| |||| || |||||||||||| ||| || | ||||| ||| ||||||||
Sbjct 1476 GCCGGCGGAGCTTGTTGTCCAGTAGAAGGATTCGGGAAGTGACATGGACGGGAGGATACG 1535
Query 32930 GCTGGGCGTCGCA 32942
||| ||||||
Sbjct 1536 AATGGCGGTCGCA 1548
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107142956867184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |