Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq10593 89.7 6e-13 >seq10593 Length=94130 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171613 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 171672 ||||| | ||| |||| ||||| ||||| | || ||| | || | |||| ||||||| Sbjct 2376 GAACTGCTGTGGTTTATCAAAGGATCAACAAACTCGAAAGAGTTGACAGATAAAGGTGTT 2317 Query 171673 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 171732 | ||||| |||| |||||||| || | || || || | | || || ||||| || Sbjct 2316 CATATTTGGGATGAGAATGGTTCGCGGGCTTTCTTGGACTCCTATGGTTTCACTGATAGG 2257 Query 171733 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792 |||| || ||||| || || | ||||| || || ||| | || || || |||| Sbjct 2256 GAAGAGGGCGATTTGGGACCTGTCTATGGTTTCCAGTGGCGGCACTTTGGCGCCGAATAC 2197 Query 171793 ATCGACTGTTATACAGATTACACAGGACAAGG 171824 | ||| ||| ||||||||||||||||| Sbjct 2196 AAAGACATGCGTACGGATTACACAGGACAAGG 2165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628435851816960