Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_023724.1
Length=62991
Score E
Sequences producing significant alignments: (Bits) Value
seq8239 98.7 4e-16
seq3805 82.4 3e-11
>seq8239
Length=1603
Score = 98.7 bits (108), Expect = 4e-16
Identities = 101/132 (77%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 52002 CCGTTCGTGCATCCGCACGTTGCCCTCATGCCCGACGCGCACGTCGGCAAAGGTTCGTCT 52061
|||||||| ||| || ||| | ||||| |||| |||| | ||||| || || |
Sbjct 1465 CCGTTCGTCGGGCCGTGGGTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACC 1524
Query 52062 GTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGTGTCGACATC 52121
|| || | || ||||| |||||||| || ||||||| || |||||||| |||||||||
Sbjct 1525 GTGGGCTCGGTGATCCCGACCCGCGGTGCGATCATCCCGGCGGCGGTCGGCGTCGACATC 1584
Query 52122 GGCTGCGGCATG 52133
||||||||||||
Sbjct 1585 GGCTGCGGCATG 1596
>seq3805
Length=3888
Score = 82.4 bits (90), Expect = 3e-11
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCC 649
|||||||||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2184 TAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCC 2238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201416604566592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |