Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq8239 86.0 2e-12 >seq8239 Length=1603 Score = 86.0 bits (94), Expect = 2e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 49393 CCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAAGGGTTCATCG 49452 ||||||||| ||| ||||| ||||||| |||| |||| |||||||| | | Sbjct 1465 CCGTTCGTCGGGCCGTGGGTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACC 1524 Query 49453 GTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGGCGTGGACATC 49512 || ||| | || |||||||| || || | |||||||| ||||| ||||| |||||| Sbjct 1525 GTGGGCTCGGTGATCCCGACCCGCGGTGCGATCATCCCGGCGGCGGTCGGCGTCGACATC 1584 Query 49513 GGCTGCGGGATG 49524 |||||||| ||| Sbjct 1585 GGCTGCGGCATG 1596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193732076277600