Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq11665 98.7 1e-15 >seq11665 Length=82268 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/126 (78%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 146449 GACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATATCCCCCTTCTCTACCA 146508 |||||| ||||| |||||||| |||||||||||||||| ||||| || ||| | | Sbjct 2822 GACCATAATTAATCTCGCGCAGAATTTTGTGGGCAGCAACAATATTAATCTGCTCCAACC 2763 Query 146509 GAT-GGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTGCAAGTCCCAGATATAT 146567 || || |||||||| ||||| | | || || ||||| ||||| ||||| ||||| || Sbjct 2762 TATCGGTCAATTCGGTACAAGACTTGCTGGCGGAAAGGATGCTGCCAGTCCGAGATACAT 2703 Query 146568 TTTCAC 146573 |||||| Sbjct 2702 TTTCAC 2697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521466481532480