Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_024365.1
Length=51090
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 105 2e-18
seq6732 86.0 2e-12
>seq7345
Length=15758
Score = 105 bits (116), Expect = 2e-18
Identities = 84/100 (84%), Gaps = 1/100 (1%)
Strand=Plus/Plus
Query 12922 GAGCGGGTAtttttttGCCTGGAGAAACATC-GATGCCGATCACCGCGCAGCAACTACTG 12980
||||| | ||||| | ||||||||||| | |||||| ||||| | ||||||||| |||
Sbjct 15501 GAGCGTGCCTTTTTGTTCCTGGAGAAACCACAGATGCCCATCACTGAGCAGCAACTGCTG 15560
Query 12981 CAGATCCTCCCGAACGCCGGCCAGAGAGCCGGCGTTTTTG 13020
|| ||||||||||||||||||| |||||||||||||||
Sbjct 15561 CATATCCTCCCGAACGCCGGCCCTCGAGCCGGCGTTTTTG 15600
>seq6732
Length=16230
Score = 86.0 bits (94), Expect = 2e-12
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 15655 CTTGCATGGGGTGCTAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCA 15704
|||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 14549 CTTGCATGGGGTGCAAGGGGTCGAGTGTTCGAATCACTCCGTCCCGACCA 14500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163342856451264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |