Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq11807 86.0 1e-11
>seq11807
Length=11578
Score = 86.0 bits (94), Expect = 1e-11
Identities = 131/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353
|||||||| || || | || ||| |||| | || ||||||||| ||||||| ||
Sbjct 7646 GATATTGTCGAAAGGCACCTCAAAGACGATGACTTAGTGCTGTTCAATCGGCAACCGTCT 7705
Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTCG 305412
|||| ||| | || ||| | || | || ||| |||| | || || | ||| |
Sbjct 7706 TTGCACAAATTAAGCATAATGACACACAGAGCCAAGATATTGGA-GCATCGAACGTTTAG 7764
Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472
||| |||| | | | |||||| || || ||||| ||||||||||| |||||||||||| |
Sbjct 7765 ATTCAATGAATGCGTTTGTACACCCTACAATGCCGATTTTGATGGGGATGAAATGAATCT 7824
Query 305473 GCAT 305476
|||
Sbjct 7825 CCAT 7828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186628259510696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |