Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq11807 86.0 1e-11 >seq11807 Length=11578 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 305294 GATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCA 305353 |||||||| || || | || ||| |||| | || ||||||||| ||||||| || Sbjct 7646 GATATTGTCGAAAGGCACCTCAAAGACGATGACTTAGTGCTGTTCAATCGGCAACCGTCT 7705 Query 305354 CTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTCG 305412 |||| ||| | || ||| | || | || ||| |||| | || || | ||| | Sbjct 7706 TTGCACAAATTAAGCATAATGACACACAGAGCCAAGATATTGGA-GCATCGAACGTTTAG 7764 Query 305413 ATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATAT 305472 ||| |||| | | | |||||| || || ||||| ||||||||||| |||||||||||| | Sbjct 7765 ATTCAATGAATGCGTTTGTACACCCTACAATGCCGATTTTGATGGGGATGAAATGAATCT 7824 Query 305473 GCAT 305476 ||| Sbjct 7825 CCAT 7828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186628259510696