Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq7200 114 3e-20
seq9711 102 2e-16
>seq7200
Length=105881
Score = 114 bits (126), Expect = 3e-20
Identities = 144/195 (74%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| |||||||||||||| ||||| |||||||| || ||| |||
Sbjct 105144 CAGATTTTTGTCAAAACTCTCACAGGAAAAACCATCACATTGGAAGTCGAGGCTTCGGAC 105203
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| ||||| || ||||||||| |||||||| || ||||||||| ||||| ||
Sbjct 105204 ACGATCGAAAACGTCAAAGCAAAA-ATTCAAGATAAGGAAGGAATTCCTCCGGATCAGCA 105262
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
|||| | ||||| || || || || | || || || | || | | ||||||||| |
Sbjct 105263 AAGATTGATCTTTGCTGGCAAACAACTTGAGGACGGTCGCACACTTTCTGATTACAACAT 105322
Query 206352 CCAGAAAGAGTCTAC 206366
|| ||||| || ||
Sbjct 105323 TCAAAAAGAATCAAC 105337
>seq9711
Length=151070
Score = 102 bits (112), Expect = 2e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || ||||| || ||||| ||||| || ||| || ||||| ||||
Sbjct 104034 CAAAACCTTGACGGGAAAGACCATCACATTGGAGGTTGAAGCGTCAGACACGATCGAGAA 104093
Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302
|| ||||| ||| ||||| || || |||||||| ||||| || || | ||||
Sbjct 104094 CGTCAAAGCCAAA-ATTCAGGATAAGGAAGGAATCCCACCGGATCAGCAGAGGTTGATCT 104152
Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362
|||||||||||||| | || || || | || | | ||||| ||| | |||||||| |
Sbjct 104153 TCGCCGGAAAGCAGCTAGAGGACGGCCGCACGCTTTCAGATTATAACATTCAGAAAGAAT 104212
Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390
| ||||| || | |||||||| |||||
Sbjct 104213 CCACTCTGCATTTAGTTTTGAGGCTTCG 104240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181637035729256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |