Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq7200 114 3e-20 seq9711 102 2e-16 >seq7200 Length=105881 Score = 114 bits (126), Expect = 3e-20 Identities = 144/195 (74%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| |||||| |||||||||||||| ||||| |||||||| || ||| ||| Sbjct 105144 CAGATTTTTGTCAAAACTCTCACAGGAAAAACCATCACATTGGAAGTCGAGGCTTCGGAC 105203 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || ||||| || ||||||||| |||||||| || ||||||||| ||||| || Sbjct 105204 ACGATCGAAAACGTCAAAGCAAAA-ATTCAAGATAAGGAAGGAATTCCTCCGGATCAGCA 105262 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 |||| | ||||| || || || || | || || || | || | | ||||||||| | Sbjct 105263 AAGATTGATCTTTGCTGGCAAACAACTTGAGGACGGTCGCACACTTTCTGATTACAACAT 105322 Query 206352 CCAGAAAGAGTCTAC 206366 || ||||| || || Sbjct 105323 TCAAAAAGAATCAAC 105337 >seq9711 Length=151070 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || ||||| || ||||| ||||| || ||| || ||||| |||| Sbjct 104034 CAAAACCTTGACGGGAAAGACCATCACATTGGAGGTTGAAGCGTCAGACACGATCGAGAA 104093 Query 206244 AGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||| ||| ||||| || || |||||||| ||||| || || | |||| Sbjct 104094 CGTCAAAGCCAAA-ATTCAGGATAAGGAAGGAATCCCACCGGATCAGCAGAGGTTGATCT 104152 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||||||||||||| | || || || | || | | ||||| ||| | |||||||| | Sbjct 104153 TCGCCGGAAAGCAGCTAGAGGACGGCCGCACGCTTTCAGATTATAACATTCAGAAAGAAT 104212 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTCG 206390 | ||||| || | |||||||| ||||| Sbjct 104213 CCACTCTGCATTTAGTTTTGAGGCTTCG 104240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181637035729256