Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq2842 132 5e-26 >seq2842 Length=3006 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142252 CAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAGCTGCATCTG 142311 |||||||| ||| | || ||||||| || || || |||| ||||||||||| ||| Sbjct 1390 CAGATGCGCTTCGACCTCAACGAAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACCTG 1449 Query 142312 AAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATCAAGTATCTT 142371 ||||||||| ||| || ||||||||||| || ||||| || |||||| || || Sbjct 1450 CGCTCGATCATCCACGAGCTGCTGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTG 1509 Query 142372 CACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAACCTCGGACCT 142431 | || || | || ||||||||| || ||||| || | |||||| ||||||| || Sbjct 1510 AAGGACAACCAGGTGCGGATCTGGGACGAGTGGGCCGACGAGAATGGCGACCTCGGCCCG 1569 Query 142432 GTCTACGGCAAGCAGTGG 142449 |||||||||| ||||||| Sbjct 1570 GTCTACGGCAGGCAGTGG 1587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500423274271360