Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq8165 199 1e-46 >seq8165 Length=1351 Score = 199 bits (220), Expect = 1e-46 Identities = 379/554 (68%), Gaps = 7/554 (1%) Strand=Plus/Plus Query 32498 CAGCCGTGCAAACCTGCTGAACGAAAACGAA-GTCACCACCATCATTCGCCAGGACGGTT 32556 |||||| || |||||||||||| || |||| || | |||||||| ||| | | || | Sbjct 72 CAGCCGCGCCAACCTGCTGAAC-CAATCGAACGTGGCGACCATCATCCGCGAAGGTGGCT 130 Query 32557 TCCGCCTGTGGGGCAACCGCACCACTTCCAGCGATCCGAAATGGGCGTTTCTGTGCGTTG 32616 ||||||||||||||||||| ||| | |||||| | ||| ||| ||| ||||| || | Sbjct 131 TCCGCCTGTGGGGCAACCGTACCGCCAGCAGCGACCAGAAGTGGCAGTTCCTGTGTGTGG 190 Query 32617 TTCGCACGGCTGACATCATCAATGACAGCCTGTTGCGTGCACACCTGTGGGCCGTAGACC 32676 | ||||| || |||||||| |||||||| | || || ||||||||||| |||| Sbjct 191 TGCGCACTGCCGACATCATTGCCGACAGCCTCGAGGCCGCCCATCTGTGGGCCGTCGACC 250 Query 32677 GTGGCATCACCAAACAATACGTCAATGACGTGATTGAAGGCGTGAACGCGTACCTGCGCA 32736 | ||||||| ||| |||||| | |||||| ||| || || || || | ||||||| Sbjct 251 GCGGCATCAGCAAGACCTACGTCGACGACGTGCGTGAGGGTGTCAATGCCTTCCTGCGCG 310 Query 32737 ACCTGGTGAGCCTGGGCGCAATTCTTGGCGGCACGTGTTGGGCTGACCCTGACTTAAATA 32796 |||| || || ||| || || || ||||||| || |||| ||||| ||| | || Sbjct 311 GCCTGAAGACCCAGGGTGCGATCCTCGGCGGCAACTGCTGGGTCGACCCCGACCTGAACG 370 Query 32797 CTGCTGACCAAATCGCTGACGGTAAGGTATACTTTGATTTTGATTTCACGCCTGTTTATC 32856 | || ||| | || | || | |||| || || || ||||| || || | Sbjct 371 CAGCGGACAGCGTGGCCCAGGGCCGCTTCTACTGGGACTTCGACTTCACCCCGACCTACC 430 Query 32857 CGGCTGAACACATTATCTTCCGCAGCCAATTGACCAACGATTATATTAGTGAGGTATTCG 32916 ||| ||| || | | |||||||| || ||| |||| | || | ||| | ||| Sbjct 431 CGGGTGAGCAGCTGACCTTCCGCATGCACATGAACAACAACTACGTCTCGGAGATCTTCT 490 Query 32917 AATAATGGC-CGCACGTGACGTTTTGAAAAACATCAACTTATTTGTTGATGGCCGTGGTT 32975 || ||||| |||| | || |||||| |||| || | || || ||| |||| Sbjct 491 AAGCATGGCGCGCAAGATCCG----CAAAAACTTCAATTTCTACGTCGACGGCAAGGGTT 546 Query 32976 ACGCGGGCCAGGTGGAGAGCGTCACGCCGCCCACCTTAACCCTGCAAACCGAAGAATTCC 33035 | || ||| ||| || | |||| | |||| | || ||| | ||||| || |||| Sbjct 547 ATGCCGGCAGCGTGATGACCTTCACCGCTCCCAAGCTGACGCTGAAGACCGAGGACTTCC 606 Query 33036 GCGCAGGCGGCATG 33049 || ||||||||| Sbjct 607 AGGCCGGCGGCATG 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135382086598416