Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_025430.1
Length=42351
Score E
Sequences producing significant alignments: (Bits) Value
seq8165 199 1e-46
>seq8165
Length=1351
Score = 199 bits (220), Expect = 1e-46
Identities = 379/554 (68%), Gaps = 7/554 (1%)
Strand=Plus/Plus
Query 32498 CAGCCGTGCAAACCTGCTGAACGAAAACGAA-GTCACCACCATCATTCGCCAGGACGGTT 32556
|||||| || |||||||||||| || |||| || | |||||||| ||| | | || |
Sbjct 72 CAGCCGCGCCAACCTGCTGAAC-CAATCGAACGTGGCGACCATCATCCGCGAAGGTGGCT 130
Query 32557 TCCGCCTGTGGGGCAACCGCACCACTTCCAGCGATCCGAAATGGGCGTTTCTGTGCGTTG 32616
||||||||||||||||||| ||| | |||||| | ||| ||| ||| ||||| || |
Sbjct 131 TCCGCCTGTGGGGCAACCGTACCGCCAGCAGCGACCAGAAGTGGCAGTTCCTGTGTGTGG 190
Query 32617 TTCGCACGGCTGACATCATCAATGACAGCCTGTTGCGTGCACACCTGTGGGCCGTAGACC 32676
| ||||| || |||||||| |||||||| | || || ||||||||||| ||||
Sbjct 191 TGCGCACTGCCGACATCATTGCCGACAGCCTCGAGGCCGCCCATCTGTGGGCCGTCGACC 250
Query 32677 GTGGCATCACCAAACAATACGTCAATGACGTGATTGAAGGCGTGAACGCGTACCTGCGCA 32736
| ||||||| ||| |||||| | |||||| ||| || || || || | |||||||
Sbjct 251 GCGGCATCAGCAAGACCTACGTCGACGACGTGCGTGAGGGTGTCAATGCCTTCCTGCGCG 310
Query 32737 ACCTGGTGAGCCTGGGCGCAATTCTTGGCGGCACGTGTTGGGCTGACCCTGACTTAAATA 32796
|||| || || ||| || || || ||||||| || |||| ||||| ||| | ||
Sbjct 311 GCCTGAAGACCCAGGGTGCGATCCTCGGCGGCAACTGCTGGGTCGACCCCGACCTGAACG 370
Query 32797 CTGCTGACCAAATCGCTGACGGTAAGGTATACTTTGATTTTGATTTCACGCCTGTTTATC 32856
| || ||| | || | || | |||| || || || ||||| || || |
Sbjct 371 CAGCGGACAGCGTGGCCCAGGGCCGCTTCTACTGGGACTTCGACTTCACCCCGACCTACC 430
Query 32857 CGGCTGAACACATTATCTTCCGCAGCCAATTGACCAACGATTATATTAGTGAGGTATTCG 32916
||| ||| || | | |||||||| || ||| |||| | || | ||| | |||
Sbjct 431 CGGGTGAGCAGCTGACCTTCCGCATGCACATGAACAACAACTACGTCTCGGAGATCTTCT 490
Query 32917 AATAATGGC-CGCACGTGACGTTTTGAAAAACATCAACTTATTTGTTGATGGCCGTGGTT 32975
|| ||||| |||| | || |||||| |||| || | || || ||| ||||
Sbjct 491 AAGCATGGCGCGCAAGATCCG----CAAAAACTTCAATTTCTACGTCGACGGCAAGGGTT 546
Query 32976 ACGCGGGCCAGGTGGAGAGCGTCACGCCGCCCACCTTAACCCTGCAAACCGAAGAATTCC 33035
| || ||| ||| || | |||| | |||| | || ||| | ||||| || ||||
Sbjct 547 ATGCCGGCAGCGTGATGACCTTCACCGCTCCCAAGCTGACGCTGAAGACCGAGGACTTCC 606
Query 33036 GCGCAGGCGGCATG 33049
|| |||||||||
Sbjct 607 AGGCCGGCGGCATG 620
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135382086598416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |