Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq7200 131 2e-25
seq9711 113 4e-20
seq6771 111 1e-19
>seq7200
Length=105881
Score = 131 bits (144), Expect = 2e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| || | ||||||||| | | |||| ||||| ||||| |||||||| | ||
Sbjct 105818 ACGCAAACGGAGAACCAAATGCAAGGTTGATTCTTTCTGAATATTGTAGTCAGAAAGTGT 105759
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| |||||| |||||||| |||| | |||||| | ||||||||||||||| || ||
Sbjct 105758 ACGACCATCTTCCAGCTGTTTTCCGGCAAAGATTAACCTCTGTTGATCTGGAGGGATTCC 105699
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| |||||| ||| | | ||| | || || | | ||| ||||| |
Sbjct 105698 TTCCTTATCCTGAATTTTGGCTTTGACATTTTCGATCGTGTCCGATGCCTCAACTTCCAA 105639
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||||| ||||| | |||||| |||||
Sbjct 105638 TGTAATGGTCTTTCCAGTCAATGTTTTAACGAAAATTTGCAT 105597
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| || || | |||||| || | | || || ||||| || |||||||| || |||
Sbjct 104906 ACGTAATCGAAGAACCAAGTGAAGAGTCGATTCCTTTTGGATATTGTAGTCAGACAAGGT 104847
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||||| |||||||| || | | |||| | |||||| || || || || |||||
Sbjct 104846 ACGTCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGTGGGATGCC 104787
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|||||| || ||| ||| ||||| | || | ||| || | | ||| || || |
Sbjct 104786 TTCTTTGTCCTGAATCTTTGCTTTCACGTTCTCGATAGTGTCAGAAGCCTCAACCTCAAG 104727
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||||| || || | ||||||||||||
Sbjct 104726 AGTTATGGTCTTTCCAGTCAACGTCTTCACGAAAATCTGCAT 104685
Score = 98.7 bits (108), Expect = 9e-16
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| || | ||||||||| | | |||| || |||||||| || || || | ||
Sbjct 105134 ACGCAAACGAAGAACCAAATGCAAGGTTGATTCCTTTTGAATATTATAATCTGAGAGAGT 105075
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| ||| || || || || || | | |||| | | ||| |||||||| || |||||
Sbjct 105074 ACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTGGGATGCC 105015
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||||||||| |||||| ||| | | || | ||||| | | ||| || || |
Sbjct 105014 TTCTTTATCTTGAATTTTCGCTTTGACATTCTCAATCGTATCAGAAGCCTCTACCTCCAA 104955
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || |||||||| ||||| | |||||||||||
Sbjct 104954 AGTGATGGTCTTTCCAGTCAGGGTTTTAACAAAAATCTGCAT 104913
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| || | ||| ||||| | |||| ||||||||||||||||| || | ||
Sbjct 105362 ACGCAATCGGAGAACTAAATGCAACGTTGATTCTTTTTGAATGTTGTAATCAGAAAGTGT 105303
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| || || || ||||| || | | |||| | | || ||||| ||||| || ||
Sbjct 105302 GCGACCGTCCTCAAGTTGTTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGGAATTCC 105243
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| ||||||| ||| | | ||| | || || | | ||| ||||| |
Sbjct 105242 TTCCTTATCTTGAATTTTTGCTTTGACGTTTTCGATCGTGTCCGAAGCCTCGACTTCCAA 105183
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| || || |||||||| | |||||||||||
Sbjct 105182 TGTGATGGTTTTTCCTGTGAGAGTTTTGACAAAAATCTGCAT 105141
>seq9711
Length=151070
Score = 113 bits (124), Expect = 4e-20
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| || | ||||||||| | | | || ||||| ||||||||||||||| | ||
Sbjct 104013 ACGCAAACGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGAAAGTGT 103954
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
||| |||||| || ||||| || | |||||| | ||| ||||| ||||| || ||
Sbjct 103953 ACGGCCATCTTCCAGTTGTTTTCCAGCGAAGATTAATCTCTGCTGATCCGGAGGGATTCC 103894
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| |||||| ||| | | ||| | || || | | || || || |
Sbjct 103893 TTCCTTATCTTGAATTTTGGCTTTGACATTTTCAATTGTGTCCGAAGCTTCAACCTCCAA 103834
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||||| ||||| |||||||| | |||||||||||
Sbjct 103833 TGTAATGGTTTTGCCAGTGAGAGTTTTAACAAAAATCTGCAT 103792
Score = 104 bits (114), Expect = 2e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
||| |||||||||| | |||||||| |||||||||||||| | ||||| |||
Sbjct 103776 CAAGACCAAATGTAACGTAGACTCTTTCTGAATGTTGTAGTCTGAAAGTGTACGACCATC 103717
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| |||||||| |||| | |||||| | ||||||||||||||| || ||||| |||||
Sbjct 103716 TTCCAGCTGTTTTCCGGCAAAGATTAACCTCTGTTGATCTGGAGGGATTCCTTCCTTATC 103657
>seq6771
Length=7421
Score = 111 bits (122), Expect = 1e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||| ||||| ||| | | || || || || ||||| |||||| | || | |
Sbjct 309 CGCAGAACCAGATGAAGCGTAGATTCCTTCTGGATGTTATAGTCGGAAAGAGTTCTGCCA 250
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| || ||||| || | | | ||||||||||| ||||||||||| |||||||||||
Sbjct 249 TCTTCAAGTTGTTTGCCAGCAAAAATTAGACGCTGCTGATCTGGAGGAATGCCTTCTTTG 190
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || ||| | | || | ||| || | | || ||||||| || |
Sbjct 189 TCTTGGATCTTAGCTTTGACATTCTCTATAGTGTCTGAAGCTTCAACTTCGAGGGTGATA 130
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127
||||||||||| |||||||||| ||| ||||||||| ||
Sbjct 129 GTTTTACCAGTGAGAGTTTTTACGAAGATCTGCATGCCT 91
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||| || || | |||| || ||||| |||||||| || | || | |
Sbjct 537 CGCAAAACTAAGTGGAGTGTTGATTCCTTTTGGATGTTGTAATCTGAAAGAGTCCTGCCA 478
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| |||||||| || | | ||||||||||||||||| || || || || |||||
Sbjct 477 TCTTCAAGCTGTTTGCCAGCGAAAATTAGACGCTGTTGATCCGGGGGAATTCCCTCTTTG 418
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||||| ||||| | || | |||||| | | || ||||| | || |
Sbjct 417 TCCTGGATTTTAGCTTTCACGTTCTCTATAGTATCCGAAGCTTCAACTTCAAGGGTGATA 358
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127
|||||||| || |||||||||| ||| ||||||||| ||
Sbjct 357 GTTTTACCGGTGAGAGTTTTTACGAAGATCTGCATGCCT 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476538898080960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |