Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2842 196 6e-45 >seq2842 Length=3006 Score = 196 bits (216), Expect = 6e-45 Identities = 233/316 (74%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983 |||| | |||||| ||| | ||||||||| ||||| || ||||| ||||| ||| Sbjct 1936 GCTCGAAGTGGTTCGAGTACAGGTGCGCGTCACCCAGCGTATGCACGAAGTCGCCCACGC 1877 Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043 |||||||| | || |||||||||| ||| ||||||| ||||||||| |||||||| | Sbjct 1876 CCAGGCCGGTGGCCTGCGCCACCATGTGGGTCAGCAGCGCGTAGCTGGCGATGTTGAACG 1817 Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103 | || || ||| ||||| || | ||||||||||||||| ||||| ||||| Sbjct 1816 GCACACCGAGGAAGATGTCACCGCTGCGCTGGTACAGCTGGCAGCTGAGCTTGCCGTCCA 1757 Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163 ||||||| |||||| ||||| ||||||||||| ||||||||| | || || | Sbjct 1756 CCACGTAGAACTGGAACAGGTTGTGGCACGGCATCAGCGCCATCTGCGAAAGCTCGCCCA 1697 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||||| |||||||||||| | |||||||| | ||| ||||| || | | Sbjct 1696 CGTTCCAGGCGCTGACCACCAGCCGGCGCGAATCGGGGTTGCGCTTGATCTCGTCCACCA 1637 Query 147224 CCCACCTCAGCTGGTC 147239 |||| || |||||| Sbjct 1636 GCCACTGCATCTGGTC 1621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583399484870400