Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq2842 196 6e-45
>seq2842
Length=3006
Score = 196 bits (216), Expect = 6e-45
Identities = 233/316 (74%), Gaps = 0/316 (0%)
Strand=Plus/Minus
Query 146924 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCT 146983
|||| | |||||| ||| | ||||||||| ||||| || ||||| ||||| |||
Sbjct 1936 GCTCGAAGTGGTTCGAGTACAGGTGCGCGTCACCCAGCGTATGCACGAAGTCGCCCACGC 1877
Query 146984 TAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGG 147043
|||||||| | || |||||||||| ||| ||||||| ||||||||| |||||||| |
Sbjct 1876 CCAGGCCGGTGGCCTGCGCCACCATGTGGGTCAGCAGCGCGTAGCTGGCGATGTTGAACG 1817
Query 147044 GGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGG 147103
| || || ||| ||||| || | ||||||||||||||| ||||| |||||
Sbjct 1816 GCACACCGAGGAAGATGTCACCGCTGCGCTGGTACAGCTGGCAGCTGAGCTTGCCGTCCA 1757
Query 147104 CCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGG 147163
||||||| |||||| ||||| ||||||||||| ||||||||| | || || |
Sbjct 1756 CCACGTAGAACTGGAACAGGTTGTGGCACGGCATCAGCGCCATCTGCGAAAGCTCGCCCA 1697
Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223
||||||||| |||||||||||| | |||||||| | ||| ||||| || | |
Sbjct 1696 CGTTCCAGGCGCTGACCACCAGCCGGCGCGAATCGGGGTTGCGCTTGATCTCGTCCACCA 1637
Query 147224 CCCACCTCAGCTGGTC 147239
|||| || ||||||
Sbjct 1636 GCCACTGCATCTGGTC 1621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583399484870400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |