Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq7200 116 3e-21
seq9711 91.5 1e-13
>seq7200
Length=105881
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || | | || ||||| ||||| || ||||||||||| ||||| |
Sbjct 105595 CCACCACGCAAACGGAGAACTAAATGCAACGTTGATTCTTTTTGAATGTTATAATCTGAA 105536
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || |||||||| || || || ||||||| |||||| |||| ||
Sbjct 105535 AGCGTGCGGCCGTCCTCTAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCCGGTGGG 105476
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT-GCCACCGTGTCGCTCGATTCCAC 35688
| | ||||| ||| ||| ||| |||| ||| | | |||||| || ||| ||
Sbjct 105475 ATTCCTTCCTTATCC-TGAATTTTGGCTTTGACGTTCTCGATCGTGTCTGACGCTTCAAC 105417
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| ||||| || || |||||||| ||||| ||||| || |||||
Sbjct 105416 CTCCAATGTGATGGTCTTTCCCGTCAATGTTTTAACAAAAATTTGCAT 105369
Score = 105 bits (116), Expect = 6e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || | | || ||||| ||||| || ||||||||||||||||| |
Sbjct 105367 CCACCACGCAATCGGAGAACTAAATGCAACGTTGATTCTTTTTGAATGTTGTAATCAGAA 105308
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || |||| || || || || || ||||| ||||| | ||||| |||| ||||
Sbjct 105307 AGTGTGCGACCGTCCTCAAGTTGTTTGCCAGCAAAGATCAATCTTTGCTGATCCGGAGGA 105248
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||| | | ||| |||||| || | || | | |||||| | || ||
Sbjct 105247 ATTCCTTCCTTAT-CTTGAATTTTTGCTTTGACGTTTTCGATCGTGTCCGAAGCCTCGAC 105189
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
|||| ||||| ||||| || || | |||||| ||||| ||||||||||
Sbjct 105188 TTCCAATGTGATGGTTTTTCCTGTGAGAGTTTTGACAAAAATCTGCATTC 105139
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||| |||||||| | | ||||| || | || |||||||| || ||||| || |
Sbjct 104913 TTCCGCCACGTAATCGAAGAACCAAGTGAAGAGTCGATTCCTTTTGGATATTGTAGTCAG 104854
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|||||| || |||| || ||||| || || ||||| ||||| ||||||||||| | |
Sbjct 104853 ACAAGGTACGTCCGTCTTCAAGCTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCAGGTG 104794
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687
| | || || |||||| |||||| |||| | | | ||||| | || |
Sbjct 104793 GGATGCCTTCTTTGTCCTGAATCTTTGCTTTCACGTTCTCGATAGTGTCAGAAGCCTCAA 104734
Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||| | || || || || || ||||| || ||||| || ||||||||
Sbjct 104733 CCTCAAGAGTTATGGTCTTTCCAGTCAACGTCTTCACGAAAATCTGCAT 104685
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| || | | |||||||| || || ||||||||||| || ||||| |
Sbjct 105141 TTCCACCACGCAAACGAAGAACCAAATGCAAGGTTGATTCCTTTTGAATATTATAATCTG 105082
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
| || || | || || || ||||| || ||||| ||||| | |||||| || | |
Sbjct 105081 AGAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCTGGTG 105022
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCC 35686
| | || || ||| | ||| ||| || || | | | | | ||| || | ||
Sbjct 105021 GGATGC-CTTCTTTATCTTGAATTTTCGCTTTGACATTCTCAATCGTATCAGAAGCCTCT 104963
Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738
||||||| ||||| || || || |||| ||||| ||||| ||||||||||
Sbjct 104962 ACCTCCAAAGTGATGGTCTTTCCAGTCAGGGTTTTAACAAAAATCTGCATTC 104911
>seq9711
Length=151070
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | |||||| ||||||||||||||| ||| || ||||||||||| || |
Sbjct 103790 CCACCACGAAGCCTCAAGACCAAATGTAACGTAGACTCTTTCTGAATGTTGTAGTCTGAA 103731
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || |||||||| || || ||||| || |||| ||| || || | |||
Sbjct 103730 AGTGTACGACCATCTTCCAGCTGTTTTCCGGCAAAGATTAACCTCTGTTGATCTGGAGGG 103671
Query 35630 ACGCTCTCCTTGTCC 35644
| | ||||| |||
Sbjct 103670 ATTCCTTCCTTATCC 103656
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| || | | |||||||| || || || || ||||||||||| ||||
Sbjct 104018 CCACCACGCAAACGGAGAACCAAATGCAAGGTCGATTCTTTCTGAATGTTGTAGTCGGAA 103959
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||| || || || || || || || | |||||| |||| |||
Sbjct 103958 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCGAAGATTAATCTCTGCTGATCCGGAGGG 103899
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||| | | ||| ||| || || | | || | | ||||| | ||| ||
Sbjct 103898 ATTCCTTCCTTAT-CTTGAATTTTGGCTTTGACATTTTCAATTGTGTCCGAAGCTTCAAC 103840
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||||| || || ||||| || || | |||||| ||||| ||||||||
Sbjct 103839 CTCCAATGTAATGGTTTTGCCAGTGAGAGTTTTAACAAAAATCTGCAT 103792
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
|| |||||||| ||||| |||| ||| ||||| |||| || || || || || || ||
Sbjct 104438 TCTTTTTGAATATTGTAGTCGGACAAAGTTCGTCCGTCCTCGAGTTGTTTGCCAGCGAAA 104379
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664
|||| | ||||| || | ||||| || ||| ||||| ||| ||| || |||| |
Sbjct 104378 ATCAGTCTTTGCTGATCGGGAGGAATGCCCTCTTTGTCT-TGAATTTTCGCCTTCACGTT 104320
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| | || ||||| | || || ||||| || || ||||| || ||
Sbjct 104319 CTCGATTGTGTCCGAAGCCTCGACCTCTAGTGTTATAGTTTTGCCAGTTAAAGTCTTGAC 104260
Query 35725 AAATATCTGCAT 35736
||||||||||||
Sbjct 104259 AAATATCTGCAT 104248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450725214610880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |