Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_027348.1
Length=73990
Score E
Sequences producing significant alignments: (Bits) Value
seq2842 116 2e-21
>seq2842
Length=3006
Score = 116 bits (128), Expect = 2e-21
Identities = 144/192 (75%), Gaps = 15/192 (8%)
Strand=Plus/Plus
Query 21949 CTGAGCTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATC 22008
|| |||||| | || || |||||||||| |||||| ||||| || ||||| |||||||||
Sbjct 1768 CTCAGCTGCCAGCTGTACCAGCGCAGCGGTGACATCTTCCTCGGTGTGCCGTTCAACATC 1827
Query 22009 GCCAGCTACGCGCTGCTGACGCACCTCATGGC---GGCCACGG---TCGGCATGCAGGCC 22062
|||||||||||||||||||| ||| | |||| |||||| | | ||| || |||
Sbjct 1828 GCCAGCTACGCGCTGCTGACCCACATGGTGGCGCAGGCCACCGGCCTGGGCGTG--GGCG 1885
Query 22063 GAGAAGTTCATCTGGTCTGGCGGTGACTGCCACCTGTACTCGAACCACATGGACCAGGC- 22121
|| ||| | ||| |||||| |||||||||||||||||| | || |||||
Sbjct 1886 ACTTCGTGCATACG--CTG--GGTGACGCGCACCTGTACTCGAACCACTTCGAGCAGGCC 1941
Query 22122 --CAAGCAGCTG 22131
| ||||||||
Sbjct 1942 CGCGAGCAGCTG 1953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 236608198695896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |