Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22]
12,136 sequences; 257,976,923 total letters
Query= NC_027383.1
Length=44613
Score E
Sequences producing significant alignments: (Bits) Value
seq7345 84.2 6e-12
>seq7345
Length=15758
Score = 84.2 bits (92), Expect = 6e-12
Identities = 232/348 (67%), Gaps = 6/348 (2%)
Strand=Plus/Minus
Query 12852 CCACCGTTGCCGTCGCTGACCAACTGATCGCAGCGCTGCGCAATCTGGTAGAGCGCGTAC 12911
||||| || || || |||||||| |||||| ||| | |||| |||| | | | |
Sbjct 8230 CCACCCTTCCCATCCGGCACCAACTGGTCGCAGTACTGGGAAATCCGGTACATCTCCCAA 8171
Query 12912 CGGTTTAACATTTGCGGTTTGATACGCCGACCGAGGCCGAAGCGCTCAGTAATACAAATA 12971
|||| || ||| | ||||| || ||| | |||||||| || | | ||
Sbjct 8170 CGGTCTACCATCCAGGCCTTGATGCGTTTACCCACACCGAAGCGATCGTTGGTCACGATG 8111
Query 12972 TCGTACCAGTGCCACGCAGGGTTATCCGTCCATGCGCGTTTAAACGTGCCGTCCCAGTCC 13031
||||| |||||| | ||||| || ||||| || |||| | |||||||||||||
Sbjct 8110 TCGTAGGTGTGCCAGACCGGGTTGTCGGTCCAGGCCTGTTTCATCGTGCCGTCCCAGATG 8051
Query 13032 CCGGAATAGGTATGATTAATCGGGTCGTAGTTGTTCGGTATTAGAACTTTACGGCCTTTG 13091
||| |||| | | ||| ||||| ||| |||| | | | || || || || |
Sbjct 8050 CCGAGGTAGGCCCGGGTCTCCGGATCGTAATTGCTCGGCACTTGGACCTTCCGCCCGCGG 7991
Query 13092 CACTTGA-TG-GACACGCGCGGGATGTT-CTGGAACGCTTTGGCGTCGAACTCCACAAAC 13148
|| | || || |||| || ||| ||||| ||| | ||| | ||| |||||| || ||
Sbjct 7990 CAGTCGACTGTGACA-GC-CGGAATGTTGCTGAACTGCTCT-GCGCTGAACTCGACGTAC 7934
Query 13149 AACAGCGCGGTTAGCGGGTAACGCAGGCGGGCGTCGATAATCTCCGTG 13196
| ||| || || |||||| ||||| |||||||| | ||| |||
Sbjct 7933 AGCAGGGCCGTGTTCGGGTAGCGCAGCTTCGCGTCGATCACCTCGGTG 7886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142619443436400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |