Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq2842 86.0 1e-11 >seq2842 Length=3006 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 197730 AAGGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGC 197789 |||| |||||| | ||||| || ||||| || |||||||| || || ||||| || |||| Sbjct 1412 AAGGCTTCCCGCTGGTCACCACCAAGAAGCTGCACCTGCGCTCGATCATCCACGAGCTGC 1471 Query 197790 TGTGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTT 197849 |||||||||| | || || ||||||| | || ||| | || ||| || || | Sbjct 1472 TGTGGTTCCTGAAGGGCGACACCAACATCGGCTACCTGAAGGACAACCAGGTGCGGATCT 1531 Query 197850 GGCGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886 || |||||| || || ||||| |||| ||||| Sbjct 1532 GGGACGAGTGGGCCGACGAGAATGGCGACCTCGGCCC 1568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769076913330880