Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monomorium_20pharaonis_20[refseq_20GCF_5F000980195.1_202015-04-22] 12,136 sequences; 257,976,923 total letters Query= NC_027981.1 Length=42612 Score E Sequences producing significant alignments: (Bits) Value seq8165 105 2e-18 >seq8165 Length=1351 Score = 105 bits (116), Expect = 2e-18 Identities = 372/571 (65%), Gaps = 19/571 (3%) Strand=Plus/Plus Query 15694 CGACCTGTCGCGCCAACCTGCTGAACGCGAAGGAA-GTGACCACGACCATTCAGCAAAAT 15752 ||| | | |||||||||||||||||| | | ||| ||| | || | ||| | || | Sbjct 68 CGAGCAGCCGCGCCAACCTGCTGAAC-CAATCGAACGTGGCGACCATCATCCGCGAAGGT 126 Query 15753 GGTTTCCGTGTTTGGGGTGACCGCACTTGTTCTGC--CGACTCTAAGTGGGCATTCAAGA 15810 || ||||| | ||||| |||| || | || |||| |||||| ||| | Sbjct 127 GGCTTCCGCCTGTGGGGCAACCGTACCGC--CAGCAGCGACCAGAAGTGGCAGTTCCTGT 184 Query 15811 ACGTGGTCATTACCAACGACATGATCGCGGACAGTCTGGTTCGCAACCACCTGTGGGCAG 15870 ||||| || |||||| || || ||||| || | | ||| |||||||| | Sbjct 185 GTGTGGTGCGCACTGCCGACATCATTGCCGACAGCCTCGAGGCCGCCCATCTGTGGGCCG 244 Query 15871 TTGACCGCAACATCACCAAAACCTACGTCGAAGACGTGACGGAAGGGGTGAACAACTACC 15930 | |||||| ||||| ||| ||||||||||| |||||| || || || || || || Sbjct 245 TCGACCGCGGCATCAGCAAGACCTACGTCGACGACGTGCGTGAGGGTGTCAATGCCTTCC 304 Query 15931 TGCGCCACCTCAAAAACATCGGTGCGATTGCCGGTGGTGAGTGCTGGGTGGACCCGGAGC 15990 ||||| ||| || | | |||||||| ||| || | |||||||| ||||| || | Sbjct 305 TGCGCGGCCTGAAGACCCAGGGTGCGATCCTCGGCGGCAACTGCTGGGTCGACCCCGACC 364 Query 15991 TGAACAGCCCCGACCAAATTCAACAGGGTAAAGTCTACTTCGATTATGACTTTAGC---G 16047 ||||| | ||| | ||||| |||||| || | ||||| | | Sbjct 365 TGAACGCAGCGGACAGCGTGGCCCAGGGCCGCTTCTACTGGGACTTCGACTTCACCCCGA 424 Query 16048 CCTACGCGCCTGCAGAGCACATCACGTTCCGCAGCCACATGGTTAACGGCTATCTGACGG 16107 ||||| || | ||||| | || ||||||| |||||| ||| ||| | ||| Sbjct 425 CCTAC---CCGGGTGAGCAGCTGACCTTCCGCATGCACATGAACAACAACTACGTCTCGG 481 Query 16108 AGGTTGTGTAAG-ATGCTACCGCAAGTAATCCGAGCAA---TGAACCTGTTCGCTGATGG 16163 || | | |||| ||| |||||| ||||| || | || | | || || || Sbjct 482 AGATCTTCTAAGCATG-GCGCGCAAG--ATCCGCAAAAACTTCAATTTCTACGTCGACGG 538 Query 16164 TAAAGGCTATGCAGGTGTGGTGGAGGAAGTAACCCCTCCAAAGCTGACTCTCAAGACCGA 16223 || || ||||| || ||| | | ||| |||| |||||||| || |||||||| Sbjct 539 CAAGGGTTATGCCGGCAGCGTGATGACCTTCACCGCTCCCAAGCTGACGCTGAAGACCGA 598 Query 16224 GGAGTTCAAGGCAGGGGGCATGGACGCCCCG 16254 ||| ||| |||| || |||||| ||| ||| Sbjct 599 GGACTTCCAGGCCGGCGGCATGCTCGCACCG 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136217166233568